Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles

Summary for 4G0R

DescriptorCapsid protein VP1, DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3'), 1,2-ETHANEDIOL, ... (8 entities in total)
Functional Keywordsbeta-barrel, ssdna binding, ssdna, icosahedral virus, virus, virus capsid protein, cell, virus-dna complex, virus/dna
Biological sourceH-1 parvovirus
Cellular locationVirion (By similarity) P03136
Total number of polymer chains2
Total molecular weight85030.73
Halder, S.,Agbandje-McKenna, M.,Nam, H.-J.,Govindasamy, L.,Vogel, M.,Dinsart, C.,Salome, N.,McKenna, R. (deposition date: 2012-07-09, release date: 2013-02-27, Last modification date: 2013-04-24)
Primary citation
Halder, S.,Nam, H.J.,Govindasamy, L.,Vogel, M.,Dinsart, C.,Salome, N.,McKenna, R.,Agbandje-McKenna, M.
Structural characterization of h-1 parvovirus: comparison of infectious virions to empty capsids.
J.Virol., 87:5128-5140, 2013
PubMed: 23449783 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.03416-12
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.21290.2%1.3%3.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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