3QZA

Joint neutron and X-ray structure of apo-D-Xylose Isomerase at pH=5.9

Summary for 3QZA

Related3KCJ 3QYS
DescriptorXylose isomerase, deuterium(1+) (3 entities in total)
Functional Keywordsjoint x-ray/neutron structure, tim barrel, isomerase, xylose, cytosol
Biological sourceStreptomyces rubiginosus
Total number of polymer chains1
Total molecular weight43285.31
Authors
Kovalevsky, A.Y.,Hanson, L.,Langan, P. (deposition date: 2011-03-04, release date: 2011-08-17, Last modification date: 2019-03-13)
Primary citation
Kovalevsky, A.Y.,Hanson, B.L.,Mason, S.A.,Yoshida, T.,Fisher, S.Z.,Mustyakimov, M.,Forsyth, V.T.,Blakeley, M.P.,Keen, D.A.,Langan, P.
Identification of the Elusive Hydronium Ion Exchanging Roles with a Proton in an Enzyme at Lower pH Values.
Angew.Chem.Int.Ed.Engl., 50:7520-7523, 2011
PubMed: 21604345 (PDB entries with the same primary citation)
DOI: 10.1002/anie.201101753
MImport into Mendeley
Experimental method
NEUTRON DIFFRACTION (2 Å)
X-RAY DIFFRACTION (1.7 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers1 0.3% 1.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 3qza
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Molmil generated image of 3qza
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Molmil generated image of 3qza
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More Biological unit images

Molmil generated image of 3qza
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Molmil generated image of 3qza
rotated about x axis by 90°
Molmil generated image of 3qza
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (3qza.pdb1.gz [499.5 KB])