3DAG

The crystal structure of [Fe]-hydrogenase holoenzyme (HMD) from METHANOCALDOCOCCUS JANNASCHII

Summary for 3DAG

• Entry DOI: 10.2210/pdb3dag/pdb
• Related: 2BOJ 3DAF 3F46 3F47
• Descriptor: 5,10-methenyltetrahydromethanopterin hydrogenase, FE (II) ION, 5'-O-[(S)-{[2-(carboxymethyl)-6-hydroxy-3,5-dimethylpyridin-4-yl]oxy}(hydroxy)phosphoryl]guanosine, ... (5 entities in total)
• Functional Keywords: rossmann fold, helix bundle, methanogenesis, one-carbon metabolism, oxidoreductase
• Biological source: Methanocaldococcus jannaschii (Methanococcus jannaschii)
• Total number of polymer chains: 1
• Total formula weight: 39363.27

Authors

Pilak, O.,Warkentin, E.,Shima, S.,Thauer, R.K.,Ermler, U. (deposition date: 2008-05-29, release date: 2008-12-09, Last modification date: 2023-08-30)

• Primary citation: Shima, S.,Pilak, O.,Vogt, S.,Schick, M.,Stagni, M.S.,Meyer-Klaucke, W.,Warkentin, E.,Thauer, R.K.,Ermler, U.; The crystal structure of [Fe]-hydrogenase reveals the geometry of the active site.; Science, 321:572-575, 2008; PubMed: 18653896; DOI: 10.1126/science.1158978

Experimental method

X-RAY DIFFRACTION (1.75 Å)