Crystal structure of ginkbilobin-2, the novel antifungal protein from Ginkgo biloba seeds

Replaces:  2E79

Summary for 3A2E

DescriptorGinkbilobin-2 (2 entities in total)
Functional Keywordsdomain 26 unknown function (duf26), c-x8-c-x2-c motif, antifungal protein, embryo-abundant protein (eap), plant protein
Biological sourceGinkgo biloba (ginkgo)
Total number of polymer chains4
Total molecular weight46684.24
Miyakawa, T.,Miyazono, K.,Sawano, Y.,Hatano, K.,Tanokura, M. (deposition date: 2009-05-13, release date: 2009-06-02, Last modification date: 2011-07-13)
Primary citation
Miyakawa, T.,Miyazono, K.,Sawano, Y.,Hatano, K.,Tanokura, M.
Crystal structure of ginkbilobin-2 with homology to the extracellular domain of plant cysteine-rich receptor-like kinases
Proteins, 77:247-251, 2009
PubMed: 19603485 (PDB entries with the same primary citation)
DOI: 10.1002/prot.22494
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.23420 0.2% 2.8% 0.2%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-21