2VE6

Crystal structure of a Murine MHC class I H2-Db molecule in complex with a photocleavable peptide

Summary for 2VE6

Related1JUF 1K8D 1FFP 1FZM 1S7T 1P1Z 1QLF 1G7P 1PQZ 1FFO 1G6R 1VAC 1YN6 2CLV 1ZHN 1S7V 1BQH 1BII 1ZT7 1S7S 1N3N 2CKB 1FZK 1G7Q 1S7Q 1KJ3 1FZJ 1RJZ 1N5A 1OSZ 1KBG 1P4L 1NEZ 1S7U 1QO3 1FFN 1KJ2 1FZO 1RJY 1LDP 2CII 1LD9 1U58 2FWO 1S7X 1WBX 1NAM 1YN7 2F74 1KPV 1ZT1 1BZ9 1DDH 1WBZ 1MHC 2AKR 1RK0 1JPF 1Z5L 1LK2 1S7W 1CE6 1MWA 1HOC 1JPG 2CLZ 1T0M 1FG2 1VAD 1RK1 1T0N 1FO0 2MHA 1LEG 2VAA 1LEK 1N59 1KPU 1NAN 2VAB 1CD1 1S7R 1WBY 1ZHB 1INQ 1L6Q
DescriptorH-2 CLASS I HISTOCOMPATIBILITY ANTIGEN D-B ALPHA CHAIN, BETA-2-MICROGLOBULIN, SENDAI VIRUS EPITOPE RESIDUES 324-332 MODIFIED AT P7, ... (4 entities in total)
Functional Keywordsphotocleavable peptide, auxiliary anchoring residue, glycoprotein, transmembrane, peptide loading, immune response, immunoglobulin domain, immune system, mhc, sev9, mhc i, membrane, secreted
Biological sourceMUS MUSCULUS (MOUSE)
More
Cellular locationMembrane; Single-pass type I membrane protein P01899
Secreted P01887
Total number of polymer chains12
Total molecular weight179629.28
Authors
Grotenbreg, G.M.,Roan, N.R.,Guillen, E.,Meijers, R.,Wang, J.H.,Bell, G.W.,Starnbach, M.N.,Ploegh, H.L. (deposition date: 2007-10-17, release date: 2008-01-22, Last modification date: 2011-07-13)
Primary citation
Grotenbreg, G.M.,Roan, N.R.,Guillen, E.,Meijers, R.,Wang, J.H.,Bell, G.W.,Starnbach, M.N.,Ploegh, H.L.
Discovery of Cd8+ T Cell Epitopes in Chlamydia Trachomatis Infection Through Use of Caged Class I Mhc Tetramers.
Proc.Natl.Acad.Sci.USA, 105:3831-, 2008
PubMed: 18245382 (PDB entries with the same primary citation)
DOI: 10.1073/PNAS.0711504105
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.65 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.28660.3%2.3%3.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2ve6
no rotation
Molmil generated image of 2ve6
rotated about x axis by 90°
Molmil generated image of 2ve6
rotated about y axis by 90°