2RJH

Crystal structure of biosynthetic alaine racemase in D-cycloserine-bound form from Escherichia coli

Summary for 2RJH

Related2RJG
DescriptorAlanine racemase, SULFATE ION, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, ... (4 entities in total)
Functional Keywordsalpha/beta barrel, cell shape, cell wall biogenesis/degradation, isomerase, peptidoglycan synthesis, pyridoxal phosphate
Biological sourceEscherichia coli
Total number of polymer chains4
Total molecular weight167574.25
Authors
Wu, D.,Hu, T.,Zhang, L.,Jiang, H.,Shen, X. (deposition date: 2007-10-15, release date: 2008-07-08, Last modification date: 2011-07-13)
Primary citation
Wu, D.,Hu, T.,Zhang, L.,Chen, J.,Du, J.,Ding, J.,Jiang, H.,Shen, X.
Residues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis
Protein Sci., 17:1066-1076, 2008
PubMed: 18434499 (PDB entries with the same primary citation)
DOI: 10.1110/ps.083495908
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.4 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.224160.1%4.1%0.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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More Biological unit images

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(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2rjh.pdb2.gz [117.4 KB])
Coordinate files for Biological unit (2rjh.pdb1.gz [121.75 KB])
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