2EFV

Crystal Structure of a Hypothetical Protein(MJ0366) from Methanocaldococcus jannaschii

Summary for 2EFV

DescriptorHypothetical protein MJ0366, PHOSPHATE ION (3 entities in total)
Functional Keywordshypothetical protein, methanocaldococcus jannaschii dsm 2661, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, unknown function
Biological sourceMethanocaldococcus jannaschii DSM 2661
Total number of polymer chains1
Total molecular weight10968.69
Authors
Kumarevel, T.S.,Karthe, P.,Kuramitsu, S.,Yokoyama, S.,RIKEN Structural Genomics/Proteomics Initiative (RSGI) (deposition date: 2007-02-26, release date: 2007-08-28, Last modification date: 2019-01-16)
Primary citation
Thiruselvam, V.,Kumarevel, T.,Karthe, P.,Kuramitsu, S.,Yokoyama, S.,Ponnuswamy, M.N.
Crystal structure analysis of a hypothetical protein (MJ0366) from Methanocaldococcus jannaschii revealed a novel topological arrangement of the knot fold
Biochem. Biophys. Res. Commun., 482:264-269, 2017
PubMed: 27845039 (PDB entries with the same primary citation)
DOI: 10.1016/j.bbrc.2016.11.052
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.9 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.251100 1.3% 2.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2efv
no rotation
Molmil generated image of 2efv
rotated about x axis by 90°
Molmil generated image of 2efv
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 2efv
no rotation
Molmil generated image of 2efv
rotated about x axis by 90°
Molmil generated image of 2efv
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2efv.pdb1.gz [31.6 KB])
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2019 Protein Data Bank Japan