1VTL

CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT

Summary for 1VTL

DescriptorDNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA BINDING PROTEIN (TBP) (3 entities in total)
Functional Keywordsprotein-dna complex, double helix, transcription-dna complex, transcription/dna
Biological sourceARABIDOPSIS THALIANA (mouse-ear cress)
Total number of polymer chains6
Total molecular weight58948.76
Authors
Kim, J.L.,Nikolov, D.B.,Burley, S.K. (deposition date: 1993-12-17, release date: 2011-07-13)
Primary citation
Kim, J.L.,Nikolov, D.B.,Burley, S.K.
Co-Crystal Structure of TBP Recognizing the Minor Groove of a TATA Element
Nature, 365:520-527, 1993
PubMed: 8413605 (PDB entries with the same primary citation)
DOI: 10.1038/365520a0
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.25 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers150.8%10.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1vtl
no rotation
Molmil generated image of 1vtl
rotated about x axis by 90°
Molmil generated image of 1vtl
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 1vtl
no rotation
Molmil generated image of 1vtl
rotated about x axis by 90°
Molmil generated image of 1vtl
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1vtl.pdb1.gz [48.9 KB])
Coordinate files for Biological unit (1vtl.pdb2.gz [49.4 KB])