1UPS

GlcNAc[alpha]1-4Gal releasing endo-[beta]-galactosidase from Clostridium perfringens

Summary for 1UPS

DescriptorGLCNAC-ALPHA-1,4-GAL-RELEASING ENDO-BETA-GALACTOSIDASE, CALCIUM ION (3 entities in total)
Functional Keywordsendo-galactosidase, clostridium perfringens, glycosyl hydrolase, psi, protein structure initiative, southeast collaboratory for structural genomics, secsg
Biological sourceCLOSTRIDIUM PERFRINGENS
Total number of polymer chains2
Total molecular weight98937.16
Authors
Primary citation
Tempel, W.,Liu, Z.J.,Horanyi, P.S.,Deng, L.,Lee, D.,Newton, M.G.,Rose, J.P.,Ashida, H.,Li, S.C.,Li, Y.T.,Wang, B.C.
Three-dimensional structure of GlcNAcalpha1-4Gal releasing endo-beta-galactosidase from Clostridium perfringens.
Proteins, 59:141-144, 2005
PubMed: 15688452 (PDB entries with the same primary citation)
DOI: 10.1002/prot.20363
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.82 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.215100.7%2.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1ups
no rotation
Molmil generated image of 1ups
rotated about x axis by 90°
Molmil generated image of 1ups
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 1ups
no rotation
Molmil generated image of 1ups
rotated about x axis by 90°
Molmil generated image of 1ups
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1ups.pdb2.gz [71.94 KB])
Coordinate files for Biological unit (1ups.pdb1.gz [72.48 KB])