1PZ5

Structural basis of peptide-carbohydrate mimicry in an antibody combining site

Summary for 1PZ5

Related1M71 1M7D 1M7I
DescriptorLight chain of Fab (SYA/J6), Heavy chain of Fab (SYA/J6), Octapeptide (MDWNMHAA), ... (4 entities in total)
Functional Keywordsantibody-antigen structure, peptide-carbohydrate mimicry, vaccine design, immune system
Biological sourceMus musculus (house mouse)
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Total number of polymer chains3
Total molecular weight48256.86
Authors
Vyas, N.K.,Vyas, M.N.,Chervenak, M.C.,Bundle, D.R.,Pinto, B.M.,Quiocho, F.A. (deposition date: 2003-07-09, release date: 2003-11-18, Last modification date: 2011-11-16)
Primary citation
Vyas, N.K.,Vyas, M.N.,Chervenak, M.C.,Bundle, D.R.,Pinto, B.M.,Quiocho, F.A.
Structural basis of peptide-carbohydrate mimicry in an antibody combining site.
Proc.Natl.Acad.Sci.USA, 100:15023-15028, 2003
PubMed: 14645714 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.2431286100
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.8 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers14 1.1% 1.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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171916
PDB entries from 2020-12-02