1P1Z

X-RAY CRYSTAL STRUCTURE OF THE LECTIN-LIKE NATURAL KILLER CELL RECEPTOR LY-49C BOUND TO ITS MHC CLASS I LIGAND H-2Kb

Summary for 1P1Z

Related1QO3 1JA3
DescriptorH-2 class I histocompatibility antigen, K-B alpha chain, Beta-2-microglobulin, Ovalbumin peptide, ... (4 entities in total)
Functional Keywordsnk, kb, mhc, antigenic peptide, ly49, ova, immune system
Biological sourceMus musculus (house mouse)
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Cellular locationMembrane; Single-pass type I membrane protein P01901
Secreted P01887 P01012
Membrane; Single-pass type II membrane protein Q64329
Total number of polymer chains4
Total molecular weight58686.61
Authors
Dimasi, N.,Natarajan, K.,Rangjin, G.,Dam, J.,Margulies, D.H.,Mariuzza, R.A. (deposition date: 2003-04-14, release date: 2003-11-11, Last modification date: 2011-07-13)
Primary citation
Dam, J.,Guan, R.,Natarajan, K.,Dimasi, N.,Chlewicki, L.K.,Kranz, D.M.,Schuck, P.,Margulies, D.H.,Mariuzza, R.A.
Variable MHC class I engagement by Ly49 natural killer cell receptors demonstrated by the crystal structure of Ly49C bound to H-2K(b).
Nat.Immunol., 4:1213-1222, 2003
PubMed: 14595439 (PDB entries with the same primary citation)
DOI: 10.1038/ni1006
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.26 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.2807910.8%18.1%1.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1p1z
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Molmil generated image of 1p1z
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Molmil generated image of 1p1z
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More Biological unit images

Molmil generated image of 1p1z
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Molmil generated image of 1p1z
rotated about x axis by 90°
Molmil generated image of 1p1z
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1p1z.pdb1.gz [161.02 KB])