1KGY

Crystal Structure of the EphB2-ephrinB2 complex

Summary for 1KGY

DescriptorEPHRIN TYPE-B RECEPTOR 2, EPHRIN-B2 (2 entities in total)
Functional Keywordsdevelopmental protein, transferase-transferase receptor complex, transferase/transferase receptor
Biological sourceMus musculus (house mouse)
Cellular locationCell membrane; Single-pass type I membrane protein P54763
Membrane; Single-pass type I membrane protein P52800
Total number of polymer chains8
Total molecular weight146289.98
Authors
Himanen, J.P.,Rajashankar, K.R.,Lackmann, M.,Cowan, C.A.,Henkemeyer, M.,Nikolov, D.B. (deposition date: 2001-11-28, release date: 2002-05-28, Last modification date: 2017-02-08)
Primary citation
Himanen, J.P.,Rajashankar, K.R.,Lackmann, M.,Cowan, C.A.,Henkemeyer, M.,Nikolov, D.B.
Crystal structure of an Eph receptor-ephrin complex.
Nature, 414:933-938, 2001
PubMed: 11780069 (PDB entries with the same primary citation)
DOI: 10.1038/414933a
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.7 Å)
NMR Information
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Structure validation

ClashscoreRamachandran outliersSidechain outliers395.6%5.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 1kgy
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Molmil generated image of 1kgy
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Molmil generated image of 1kgy
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More Biological unit images

Molmil generated image of 1kgy
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Molmil generated image of 1kgy
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Molmil generated image of 1kgy
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (1kgy.pdb2.gz [106.15 KB])
Coordinate files for Biological unit (1kgy.pdb1.gz [106.2 KB])