9WJ6
An integrated in silico-in vitro workflow for discovering high-affinity, selective antibodies to the KRAS(G12D)-MHC I complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, J (I, P) | Peptide from GTPase KRas, N-terminally processed | polymer | 10 | 875.0 | 2 | UniProt (P01116) | Homo sapiens | |
| 2 | B, F (A, K) | C8K10D5-1 Fab Light chain | polymer | 234 | 25708.6 | 2 | Homo sapiens | ||
| 3 | C, H (E, M) | HLA class I antigen | polymer | 280 | 32694.0 | 2 | UniProt (C1K0Y1) | Homo sapiens (human) | Lymphocyte antigen,MHC class I antigen |
| 4 | D, G (B, L) | C8K10D5-1 Fab heavy chain | polymer | 255 | 27236.7 | 2 | Homo sapiens | ||
| 5 | E, I (F, N) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 2 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (human) |
Sequence modifications
I, P: 1 - 10 (UniProt: P01116)
E, M: 2 - 274 (UniProt: C1K0Y1)
F, N: 1 - 99 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| Asp 3 | Gly 12 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| His 275 | - | expression tag |
| His 276 | - | expression tag |
| His 277 | - | expression tag |
| His 278 | - | expression tag |
| His 279 | - | expression tag |
| His 280 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 196787.2 | |
| All* | Total formula weight | 196787.2 |






