9TZE
70S Coxiella burnetii Ribosome with Doxycycline and HPFcold
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S ribosomal RNA | polymer | 1535 | 497437.7 | 1 | GenBank (2416246912) | Coxiella burnetii | |
| 2 | B (C) | Small ribosomal subunit protein uS3 | polymer | 227 | 25671.7 | 1 | UniProt (O85388) Pfam (PF07650) Pfam (PF00189) | Coxiella burnetii | 30S ribosomal protein S3 |
| 3 | C (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23770.7 | 1 | UniProt (Q83EQ3) Pfam (PF00163) Pfam (PF01479) | Coxiella burnetii | 30S ribosomal protein S4 |
| 4 | D (E) | Small ribosomal subunit protein uS5 | polymer | 168 | 17510.3 | 1 | UniProt (Q83EQ9) Pfam (PF00333) Pfam (PF03719) | Coxiella burnetii | 30S ribosomal protein S5 |
| 5 | E (F) | Small ribosomal subunit protein bS6 | polymer | 127 | 14603.7 | 1 | UniProt (Q83D76) Pfam (PF01250) | Coxiella burnetii | 30S ribosomal protein S6 |
| 6 | F (G) | Small ribosomal subunit protein uS7 | polymer | 191 | 21334.7 | 1 | UniProt (Q83ES8) Pfam (PF00177) | Coxiella burnetii | 30S ribosomal protein S7 |
| 7 | G (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14592.0 | 1 | UniProt (Q83ER2) Pfam (PF00410) | Coxiella burnetii | 30S ribosomal protein S8 |
| 8 | H (I) | Small ribosomal subunit protein uS9 | polymer | 139 | 15332.5 | 1 | UniProt (Q83AX9) Pfam (PF00380) | Coxiella burnetii | 30S ribosomal protein S9 |
| 9 | I (J) | Small ribosomal subunit protein uS10 | polymer | 110 | 12614.6 | 1 | UniProt (Q83ES5) Pfam (PF00338) | Coxiella burnetii | 30S ribosomal protein S10 |
| 10 | J (K) | Small ribosomal subunit protein uS11 | polymer | 123 | 13534.7 | 1 | UniProt (Q83EQ4) Pfam (PF00411) | Coxiella burnetii | 30S ribosomal protein S11 |
| 11 | K (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13786.1 | 1 | UniProt (Q83ES9) Pfam (PF00164) | Coxiella burnetii | 30S ribosomal protein S12 |
| 12 | L (M) | Small ribosomal subunit protein uS13 | polymer | 119 | 13420.7 | 1 | UniProt (P59753) Pfam (PF00416) | Coxiella burnetii | 30S ribosomal protein S13 |
| 13 | M (N) | Small ribosomal subunit protein uS14 | polymer | 99 | 11600.0 | 1 | UniProt (Q83ER3) Pfam (PF00253) | Coxiella burnetii | |
| 14 | N (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10340.2 | 1 | UniProt (Q83D88) Pfam (PF00312) | Coxiella burnetii | 30S ribosomal protein S15 |
| 15 | O (P) | Small ribosomal subunit protein bS16 | polymer | 137 | 15592.9 | 1 | UniProt (Q83E83) Pfam (PF00886) | Coxiella burnetii | 30S ribosomal protein S16 |
| 16 | P (Q) | Small ribosomal subunit protein uS17 | polymer | 89 | 10328.1 | 1 | UniProt (Q83ER7) Pfam (PF00366) | Coxiella burnetii | 30S ribosomal protein S17 |
| 17 | Q (R) | Small ribosomal subunit protein bS18 | polymer | 73 | 8569.0 | 1 | UniProt (Q83D75) Pfam (PF01084) | Coxiella burnetii | 30S ribosomal protein S18 |
| 18 | R (S) | Small ribosomal subunit protein uS19 | polymer | 95 | 10842.6 | 1 | UniProt (Q83ES0) Pfam (PF00203) | Coxiella burnetii | 30S ribosomal protein S19 |
| 19 | S (T) | Small ribosomal subunit protein bS20 | polymer | 90 | 9981.5 | 1 | UniProt (Q83ED6) Pfam (PF01649) | Coxiella burnetii | 30S ribosomal protein S20 |
| 20 | T (U) | Small ribosomal subunit protein bS21 | polymer | 74 | 8927.5 | 1 | UniProt (Q83BB9) Pfam (PF01165) | Coxiella burnetii | 30S ribosomal protein S21 |
| 21 | U (Z) | Coxiellacae Large Subunit Peptide (CLaSP) | polymer | 21 | 2530.1 | 1 | Coxiella burnetii | ||
| 22 | V (0) | Large ribosomal subunit protein bL33 | polymer | 70 | 8054.5 | 1 | UniProt (Q83EM5) Pfam (PF00471) | Coxiella burnetii | 50S ribosomal protein L33 |
| 23 | W (1) | Large ribosomal subunit protein uL24 | polymer | 107 | 11814.9 | 1 | UniProt (Q83ER5) Pfam (PF00467) Pfam (PF17136) | Coxiella burnetii | 50S ribosomal protein L24 |
| 24 | X (2) | Large ribosomal subunit protein uL18 | polymer | 117 | 13137.4 | 1 | UniProt (Q83ER0) Pfam (PF00861) | Coxiella burnetii | 50S ribosomal protein L18 |
| 25 | Y (3) | Large ribosomal subunit protein bL36 | polymer | 40 | 4668.7 | 1 | UniProt (Q4AAY2) Pfam (PF00444) | Coxiella burnetii | 50S ribosomal protein L36 |
| 26 | Z (b) | 5S ribosomal RNA | polymer | 117 | 37630.4 | 1 | GenBank (2294758066) | Coxiella burnetii | |
| 27 | AA (c) | Large ribosomal subunit protein bL19 | polymer | 115 | 13302.4 | 1 | UniProt (Q83E85) Pfam (PF01245) | Coxiella burnetii | 50S ribosomal protein L19 |
| 28 | BA (d) | Large ribosomal subunit protein uL3 | polymer | 217 | 23547.1 | 1 | UniProt (B6J263) | Coxiella burnetii | 50S ribosomal protein L3 |
| 29 | CA (e) | Large ribosomal subunit protein bL20 | polymer | 119 | 13476.0 | 1 | UniProt (Q83C13) Pfam (PF00453) | Coxiella burnetii | 50S ribosomal protein L20 |
| 30 | DA (f) | Large ribosomal subunit protein uL5 | polymer | 182 | 20782.4 | 1 | UniProt (Q83ER4) Pfam (PF00281) Pfam (PF00673) | Coxiella burnetii | 50S ribosomal protein L5 |
| 31 | EA (g) | Large ribosomal subunit protein uL6 | polymer | 178 | 19228.5 | 1 | UniProt (B6J5E7) | Coxiella burnetii | 50S ribosomal protein L6 |
| 32 | FA (h) | Large ribosomal subunit protein bL21 | polymer | 115 | 12785.9 | 1 | UniProt (Q83EE0) Pfam (PF00829) | Coxiella burnetii | 50S ribosomal protein L21 |
| 33 | GA (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 15840.5 | 1 | UniProt (B6J4G5) | Coxiella burnetii | 50S ribosomal protein L13 |
| 34 | HA (j) | Large ribosomal subunit protein uL22 | polymer | 115 | 12605.5 | 1 | UniProt (B6J258) | Coxiella burnetii | 50S ribosomal protein L22 |
| 35 | IA (k) | Large ribosomal subunit protein uL15 | polymer | 143 | 15320.0 | 1 | UniProt (B6J244) | Coxiella burnetii | 50S ribosomal protein L15 |
| 36 | JA (m) | Large ribosomal subunit protein bL17 | polymer | 126 | 14574.9 | 1 | UniProt (B6J237) | Coxiella burnetii | 50S ribosomal protein L17 |
| 37 | KA (o) | Large ribosomal subunit protein uL2 | polymer | 275 | 30481.4 | 1 | UniProt (B6J260) | Coxiella burnetii | 50S ribosomal protein L2 |
| 38 | LA (q) | Large ribosomal subunit protein bL9 | polymer | 152 | 16604.0 | 1 | UniProt (A9ND50) | Coxiella burnetii | 50S ribosomal protein L9 |
| 39 | MA (r) | Large ribosomal subunit protein uL29 | polymer | 65 | 7717.0 | 1 | UniProt (B6J5E0) | Coxiella burnetii | 50S ribosomal protein L29 |
| 40 | NA (s) | Large ribosomal subunit protein uL16 | polymer | 137 | 15532.4 | 1 | UniProt (B6J256) | Coxiella burnetii | 50S ribosomal protein L16 |
| 41 | OA (t) | Large ribosomal subunit protein uL30 | polymer | 63 | 7312.6 | 1 | UniProt (B6J5F0) | Coxiella burnetii | 50S ribosomal protein L30 |
| 42 | PA (u) | Large ribosomal subunit protein bL25 | polymer | 244 | 26577.0 | 1 | UniProt (B6J9D8) | Coxiella burnetii | 50S ribosomal protein L25,General stress protein CTC |
| 43 | QA (v) | Large ribosomal subunit protein bL32 | polymer | 64 | 7486.5 | 1 | UniProt (B6J8E7) | Coxiella burnetii | 50S ribosomal protein L32 |
| 44 | RA (w) | Large ribosomal subunit protein uL4 | polymer | 205 | 22409.7 | 1 | UniProt (A9NAM5) | Coxiella burnetii | 50S ribosomal protein L4 |
| 45 | SA (x) | Large ribosomal subunit protein uL14 | polymer | 122 | 13564.1 | 1 | UniProt (B6J5E2) | Coxiella burnetii | 50S ribosomal protein L14 |
| 46 | TA (y) | Large ribosomal subunit protein bL34 | polymer | 44 | 5357.4 | 1 | UniProt (B6J2B1) | Coxiella burnetii | 50S ribosomal protein L34 |
| 47 | UA (z) | Large ribosomal subunit protein bL35 | polymer | 64 | 7415.9 | 1 | UniProt (B6J7Y0) | Coxiella burnetii | 50S ribosomal protein L35 |
| 48 | VA (4) | Large ribosomal subunit protein bL31 | polymer | 79 | 9096.5 | 1 | UniProt (Q83D39) Pfam (PF01197) | Coxiella burnetii | 50S ribosomal protein L31 |
| 49 | WA (9) | Ribosome hibernation promoting factor | polymer | 183 | 21176.2 | 1 | UniProt (Q83FC0) Pfam (PF02482) Pfam (PF00313) | Coxiella burnetii | Hibernation factor HPF |
| 50 | XA (8) | Large ribosomal subunit protein bL27 | polymer | 90 | 10069.7 | 1 | UniProt (B6J9K3) | Coxiella burnetii | 50S ribosomal protein L27 |
| 51 | YA (7) | Large ribosomal subunit protein uL23 | polymer | 95 | 10828.6 | 1 | UniProt (Q83ES2) Pfam (PF00276) | Coxiella burnetii | 50S ribosomal protein L23 |
| 52 | ZA (6) | Large ribosomal subunit protein bL28 | polymer | 79 | 9267.0 | 1 | UniProt (B6J5S6) | Coxiella burnetii | 50S ribosomal protein L28 |
| 53 | AB (a) | 23S ribosomal RNA | polymer | 2925 | 947544.9 | 1 | Coxiella burnetii | ||
| 54 | AC, AD, AF, AG, AH... (A, a, b, d, o...) | MAGNESIUM ION | non-polymer | 24.3 | 220 | Chemie (MG) PubChem (888) | |||
| 55 | AE, AM, AN, AO, AP... (A, a, b, d, o...) | POTASSIUM ION | non-polymer | 39.1 | 167 | Chemie (K) PubChem (813) | |||
| 56 | JE, KE, LE (N, R, 3) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) PubChem (32051) | |||
| 57 | WE, XE, YE (a) | (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | non-polymer | 444.4 | 3 | Chemie (DXT) | |||
| 58 | EQ, FQ, GQ, HQ (A, K, M, a) | water | water | 18.0 | 15 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2177530.9 | |
| Non-Polymers* | Number of molecules | 393 |
| Total formula weight | 13406.0 | |
| All* | Total formula weight | 2190936.9 |
