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9SDF

Structure at 1.9 A resolution of Thermus thermophilus tyrosyl-tRNA synthetase bound to wild-type modified tRNA(Tyr), tyrosine and AMP

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Tyrosine--tRNA ligasepolymer43248786.21UniProt (P83453)
Pfam (PF00579)
Thermus thermophilus HB27Tyrosyl-tRNA synthetase,TyrRS
2B
(T)
Thermus thermophilus tRNA(Tyr)(GUA) (86-MER)polymer8627923.91Thermus thermophilus HB27
3C
(A)
ADENOSINE MONOPHOSPHATEnon-polymer347.21Chemie (AMP)
4D
(A)
TYROSINEnon-polymer181.21Chemie (TYR)
5E, J, N, O, P
(A, T)
DI(HYDROXYETHYL)ETHERnon-polymer106.15Chemie (PEG)
6F, Q
(A, T)
SULFATE IONnon-polymer96.12Chemie (SO4)
7G, H, I, L, R
(A, T)
PENTAETHYLENE GLYCOLnon-polymer238.35Chemie (1PE)
8K
(A)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
9M
(T)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
10S, T
(A, T)
waterwater18.0497Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight76710.1
Non-Polymers*Number of molecules16
Total formula weight2617.0
All*Total formula weight79327.1
*Water molecules are not included.

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PDB entries from 2025-10-22

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