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9S3R

Ternary complex structure of compound 1 bound to SMARCA2 bromodomain and DCAF16:DDB1deltaBPB

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA damage-binding protein 1polymer1140127097.51UniProt (Q16531)Homo sapiens (human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
2B
(B)
DDB1- and CUL4-associated factor 16polymer21824333.41UniProt (Q9NXF7)Homo sapiens (human)
3C
(C)
Probable global transcription activator SNF2L2polymer12314380.51UniProt (P51531)Homo sapiens (human)ATP-dependent helicase SMARCA2,BRG1-associated factor 190B,BAF190B,Protein brahma homolog,hBRM,SNF2-alpha,SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2
4D
(D)
DET1- and DDB1-associated protein 1polymer10211855.31UniProt (Q9BW61)Homo sapiens (human)Placenta cross-immune reaction antigen 1,PCIA-1
5E
(B)
ZINC IONnon-polymer65.41Chemie (ZN)
6F
(B)
2-[6-azanyl-5-[(1~{S},5~{R})-8-[2-[(~{E})-3-(azepan-1-yl)prop-1-enyl]pyridin-4-yl]-3,8-diazabicyclo[3.2.1]octan-3-yl]pyridazin-3-yl]phenolnon-polymer511.71Chemie (A1JLV)
Sequence modifications
B: 1 - 216 (UniProt: Q9NXF7)
PDBExternal DatabaseDetails
Gly -1-expression tag
Gly 0-expression tag
C: 1373 - 1493 (UniProt: P51531)
PDBExternal DatabaseDetails
Ser 1371-expression tag
Met 1372-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight177666.8
Non-Polymers*Number of molecules2
Total formula weight577.1
All*Total formula weight178243.8
*Water molecules are not included.

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PDB entries from 2026-05-20

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