9QW4
Crystal structure of human lung surfactant protein D trimeric fragment with bound synthetic PhosII-HepII-HepI ligand
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Pulmonary surfactant-associated protein D | polymer | 177 | 18835.0 | 3 | UniProt (P35247) Pfam (PF01391) Pfam (PF09006) Pfam (PF00059) | Homo sapiens (human) | SP-D,Collectin-7,Lung surfactant protein D |
| 2 | D, E, F, G, H... (A, B, C) | CALCIUM ION | non-polymer | 40.1 | 9 | Chemie (CA) | |||
| 3 | J (B) | [(2~{R},3~{S},4~{R},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-6-[(2~{R},3~{R},4~{S},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,5-bis(oxidanyl)-6-[2-[4-[2,2,2-tris(fluoranyl)ethanoylamino]phenyl]ethoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxan-3-yl] dihydrogen phosphate | non-polymer | 697.5 | 1 | Chemie (A1JBS) | |||
| 4 | N (C) | L-glycero-alpha-D-manno-heptopyranose | non-polymer | 210.2 | 1 | Chemie (GMH) | |||
| 5 | O, P, Q (A, B, C) | water | water | 18.0 | 303 | Chemie (HOH) |
Sequence modifications
A, B, C: 181 - 355 (UniProt: P35247)
| PDB | External Database | Details |
|---|---|---|
| Gly 179 | - | expression tag |
| Ser 180 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 56504.9 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 1268.4 | |
| All* | Total formula weight | 57773.3 |
