9PHC
In vitro reconstituted complex of purified S. pombe large ribosomal subunit and SNOR
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B0) | Large ribosomal subunit protein eL42 | polymer | 106 | 12239.6 | 1 | UniProt (Q9UTI8) Pfam (PF00935) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L42 |
| 2 | B (B1) | Large ribosomal subunit protein eL43A | polymer | 94 | 10444.3 | 1 | UniProt (Q9HGL8) Pfam (PF01780) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L43-A,L37A |
| 3 | C (B2) | 28S ribosomal RNA | polymer | 3498 | 1129828.3 | 1 | GenBank (157310483) | Schizosaccharomyces pombe 972h- | |
| 4 | D (B3) | 5S ribosomal RNA | polymer | 246 | 78518.9 | 1 | GenBank (157310380) | Schizosaccharomyces pombe 972h- | |
| 5 | E (B4) | 5.8S ribosomal RNA | polymer | 165 | 52880.2 | 1 | GenBank (288694) | Schizosaccharomyces pombe 972h- | |
| 6 | F (BN) | Large ribosomal subunit protein uL2C | polymer | 253 | 27151.2 | 1 | UniProt (P0CT72) Pfam (PF00181) Pfam (PF03947) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L2-C,K37,K5,KD4 |
| 7 | G (BO) | Large ribosomal subunit protein uL3A | polymer | 388 | 43889.8 | 1 | UniProt (P40372) Pfam (PF00297) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L3-A,SP-L1 |
| 8 | H (BP) | Large ribosomal subunit protein uL4A | polymer | 363 | 39839.1 | 1 | UniProt (P35679) Pfam (PF00573) Pfam (PF14374) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L4-A,L2 |
| 9 | I (BQ) | Large ribosomal subunit protein uL18B | polymer | 294 | 33538.9 | 1 | UniProt (O74306) Pfam (PF17144) Pfam (PF14204) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L5-B |
| 10 | J (BR) | Large ribosomal subunit protein eL6 | polymer | 195 | 21286.0 | 1 | UniProt (P79071) Pfam (PF01159) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L6 |
| 11 | K (BS) | Large ribosomal subunit protein uL30C | polymer | 251 | 28780.5 | 1 | UniProt (O60143) Pfam (PF08079) Pfam (PF00327) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L7-C |
| 12 | L (BT) | Large ribosomal subunit protein eL8 | polymer | 259 | 28659.8 | 1 | UniProt (O13672) Pfam (PF01248) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L8,L4,L7A |
| 13 | M (BU) | Large ribosomal subunit protein uL6B | polymer | 189 | 21413.9 | 1 | UniProt (O74905) Pfam (PF00347) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L9-B |
| 14 | N (BV) | Large ribosomal subunit protein uL16A | polymer | 221 | 25421.6 | 1 | UniProt (Q09127) Pfam (PF00252) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L10-A,QM protein homolog,SpQM |
| 15 | O (BW) | Large ribosomal subunit protein uL5A | polymer | 174 | 19928.2 | 1 | UniProt (P0CT77) Pfam (PF00281) Pfam (PF00673) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L11-A |
| 16 | P (BX) | Large ribosomal subunit protein eL13 | polymer | 208 | 23578.1 | 1 | UniProt (O74175) Pfam (PF01294) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L13 |
| 17 | Q (BY) | Large ribosomal subunit protein eL14 | polymer | 134 | 15241.1 | 1 | UniProt (O94238) Pfam (PF00467) Pfam (PF01929) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L14 |
| 18 | R (BZ) | Large ribosomal subunit protein eL15B | polymer | 201 | 23878.6 | 1 | UniProt (Q9US22) Pfam (PF00827) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L15-B,SP-L12 |
| 19 | S (Ba) | Large ribosomal subunit protein uL13A | polymer | 197 | 22050.1 | 1 | UniProt (O42848) Pfam (PF00572) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L16-A |
| 20 | T (Bb) | Large ribosomal subunit protein uL22A | polymer | 187 | 20854.1 | 1 | UniProt (O14339) Pfam (PF00237) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L17-A |
| 21 | U (Bc) | Large ribosomal subunit protein eL18B | polymer | 187 | 21235.0 | 1 | UniProt (Q8TFH1) Pfam (PF17135) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L18-B |
| 22 | V (Bd) | Large ribosomal subunit protein eL19B | polymer | 193 | 22813.8 | 1 | UniProt (O42699) Pfam (PF01280) Pfam (PF25476) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L19-B |
| 23 | W (Be) | Large ribosomal subunit protein eL20A | polymer | 176 | 20642.3 | 1 | UniProt (P0CT68) Pfam (PF01775) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L20-A,SP-L17 |
| 24 | X (Bf) | Large ribosomal subunit protein eL21B | polymer | 160 | 18390.2 | 1 | UniProt (O42706) Pfam (PF01157) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L21-B |
| 25 | Y (Bg) | Large ribosomal subunit protein eL22 | polymer | 117 | 13344.4 | 1 | UniProt (Q09668) Pfam (PF01776) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L22 |
| 26 | Z (Bh) | Large ribosomal subunit protein uL14B | polymer | 139 | 14905.5 | 1 | UniProt (P0CT61) Pfam (PF00238) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L23-B |
| 27 | AA (Bi) | Large ribosomal subunit protein eL24B | polymer | 149 | 16957.9 | 1 | UniProt (O74884) Pfam (PF01246) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L24-B |
| 28 | BA (Bj) | Large ribosomal subunit protein uL23A | polymer | 141 | 15870.7 | 1 | UniProt (Q10330) Pfam (PF03939) Pfam (PF00276) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L25-A |
| 29 | CA (Bk) | Large ribosomal subunit protein uL24 | polymer | 126 | 14375.9 | 1 | UniProt (P78946) Pfam (PF16906) Pfam (PF00467) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L26 |
| 30 | DA (Bl) | Large ribosomal subunit protein eL27A | polymer | 136 | 15421.3 | 1 | UniProt (O14388) Pfam (PF00467) Pfam (PF01777) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L27-A |
| 31 | EA (Bm) | Large ribosomal subunit protein uL15B | polymer | 148 | 16723.5 | 1 | UniProt (P57728) Pfam (PF00828) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L28-B |
| 32 | FA (Bn) | Large ribosomal subunit protein eL29 | polymer | 61 | 7224.2 | 1 | UniProt (Q92366) Pfam (PF01779) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L29,L43 |
| 33 | GA (Bo) | Large ribosomal subunit protein eL30A | polymer | 109 | 11610.6 | 1 | UniProt (P52808) Pfam (PF01248) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L30-1,L32 |
| 34 | HA (Bp) | Large ribosomal subunit protein eL31 | polymer | 113 | 13290.5 | 1 | UniProt (Q9URX6) Pfam (PF01198) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L31 |
| 35 | IA (Bq) | Large ribosomal subunit protein eL32A | polymer | 127 | 14491.1 | 1 | UniProt (P79015) Pfam (PF01655) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L32-A |
| 36 | JA (Br) | Large ribosomal subunit protein eL33A | polymer | 108 | 12212.3 | 1 | UniProt (Q9USX4) Pfam (PF01247) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L33-A,L37A |
| 37 | KA (Bs) | Large ribosomal subunit protein eL34B | polymer | 111 | 12828.2 | 1 | UniProt (Q9URT8) Pfam (PF01199) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L34-2,60S ribosomal protein L34-B |
| 38 | LA (Bt) | Large ribosomal subunit protein uL29 | polymer | 122 | 14333.9 | 1 | UniProt (O74904) Pfam (PF00831) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L35 |
| 39 | MA (Bu) | Large ribosomal subunit protein eL36B | polymer | 99 | 11287.4 | 1 | UniProt (O94658) Pfam (PF01158) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L36-B |
| 40 | NA (Bv) | Large ribosomal subunit protein eL37B | polymer | 91 | 10112.8 | 1 | UniProt (P05733) Pfam (PF01907) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L37-B,SP-L27 |
| 41 | OA (Bw) | Large ribosomal subunit protein eL38A | polymer | 74 | 8511.1 | 1 | UniProt (Q9USR7) Pfam (PF01781) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L38-1 |
| 42 | PA (Bx) | Large ribosomal subunit protein eL39 | polymer | 51 | 6326.5 | 1 | UniProt (P05767) Pfam (PF00832) | Schizosaccharomyces pombe 972h- | 60S ribosomal protein L39,SP-L36 |
| 43 | QA (By) | Large ribosomal subunit protein eL28 | polymer | 134 | 14781.0 | 1 | UniProt (O14069) Pfam (PF01778) | Schizosaccharomyces pombe 972h- | Probable 60S ribosomal protein L28e |
| 44 | RA (HS) | SDO1-like protein C21C3.19 | polymer | 106 | 11909.4 | 1 | UniProt (Q9P7K6) Pfam (PF01172) | Schizosaccharomyces pombe 972h- | |
| 45 | SA, TA, UA (B0, B1, Bv) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) PubChem (32051) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 44 |
| Total formula weight | 2019021.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 196.2 | |
| All* | Total formula weight | 2019218.2 |
