9OOG
Cryo-EM structure of vaccine-elicited antibody T3_NB_G05 in complex with HIV Env trimer Q23-APEX-GT1.N187S
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, I (H, I, J) | T3_NB_G05 heavy chain | polymer | 235 | 25198.2 | 3 | Mus musculus | ||
| 2 | B, F, J (L, M, N) | T3_NB_G05 light chain | polymer | 214 | 23470.7 | 3 | Mus musculus | ||
| 3 | C, G, K (b, d, f) | HIV Env gp120 | polymer | 503 | 56704.6 | 3 | Homo sapiens | ||
| 4 | D, H, L (c, e, g) | HIV Env gp41 ectodomain | polymer | 153 | 17205.7 | 3 | Homo sapiens | ||
| 5 | DA, EA, FA, GA, HA... (X, Y, Z, a, h...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 25 | In PDB GlyTouCan (G42666HT) | |||
| 6 | N, NA, T, Z (B, n, K, T) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 4 | In PDB GlyTouCan (G15407YE) | |||
| 7 | AA, O, OA (U, C, o) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 3 | In PDB GlyTouCan (G22768VO) | |||
| 8 | BA, P, PA (V, D, p) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 3 | In PDB GlyTouCan (G94626GC) | |||
| 9 | CA, Q, QA (W, E, q) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 3 | In PDB GlyTouCan (G56014GC) | |||
| 10 | AB, AC, BB, BC, CB... (b, g, c, d, e...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 31 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 367737.4 | |
| Branched | Number of molecules | 38 |
| Total formula weight | 21640.0 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 6857.4 | |
| All* | Total formula weight | 396234.8 |
