9O03
Crystal structure of AfOgg1:8OG-DNA duplex in a product-bound state
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 8-oxoguanine DNA glycosylase/AP lyase | polymer | 203 | 23402.4 | 1 | UniProt (O29876) Pfam (PF22175) | Archaeoglobus fulgidus | |
| 2 | B (D) | DNA (5'-D(P*GP*AP*GP*TP*CP(PUA))-3') | polymer | 6 | 1698.1 | 1 | synthetic construct | ||
| 3 | C (B) | DNA (5'-D(P*AP*CP*CP*TP*GP*CP*A)-3') | polymer | 7 | 2082.4 | 1 | synthetic construct | ||
| 4 | D (C) | DNA (5'-D(*TP*GP*CP*AP*GP*GP*TP*CP*GP*AP*CP*TP*CP*TP*A)-3') | polymer | 15 | 4585.0 | 1 | synthetic construct | ||
| 5 | E, F (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 6 | G, H, I (A, B, C) | water | water | 18.0 | 80 | Chemie (HOH) |
Sequence modifications
A: 2 - 198 (UniProt: O29876)
| PDB | External Database | Details |
|---|---|---|
| Ile -4 | - | expression tag |
| Ser -3 | - | expression tag |
| Glu -2 | - | expression tag |
| Phe -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 31767.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 192.1 | |
| All* | Total formula weight | 31960.0 |
