9NYB
Crystal structure of the pre-reactive state of porcine OAS1 in complex with dsRNA, two ApCpp substrate analogs, three catalytic Mn2+ ions.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 2'-5'-oligoadenylate synthase 1 | polymer | 357 | 41278.3 | 1 | UniProt (Q29599) | Sus scrofa (pig) | (2-5')oligo(A) synthase 1,2-5A synthase 1,p42 OAS |
| 2 | B (B) | RNA (5'-R(*GP*GP*CP*UP*UP*UP*UP*GP*AP*CP*CP*UP*UP*UP*AP*UP*GP*AP*A)-3') | polymer | 19 | 6017.6 | 1 | synthetic construct | ||
| 3 | C (C) | RNA (5'-R(*UP*UP*CP*AP*UP*AP*AP*AP*GP*GP*UP*CP*AP*AP*AP*AP*GP*CP*C)-3') | polymer | 19 | 6069.7 | 1 | synthetic construct | ||
| 4 | D, E (A) | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | non-polymer | 505.2 | 2 | Chemie (APC) | |||
| 5 | F, G, H, I, K... (A, B, C) | MANGANESE (II) ION | non-polymer | 54.9 | 6 | Chemie (MN) PubChem (27854) | |||
| 6 | J (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 7 | M, N, O (A, B, C) | water | water | 18.0 | 874 | Chemie (HOH) |
Sequence modifications
A: 1 - 349 (UniProt: Q29599)
| PDB | External Database | Details |
|---|---|---|
| Gly 350 | - | expression tag |
| Ser 351 | - | expression tag |
| His 352 | - | expression tag |
| His 353 | - | expression tag |
| His 354 | - | expression tag |
| His 355 | - | expression tag |
| His 356 | - | expression tag |
| His 357 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 53365.6 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1402.1 | |
| All* | Total formula weight | 54767.7 |






