9NVA
Crystal structure of NP105 TCR in complex with NP366-H-2Db
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | NP105 TCR alpha-chain | polymer | 216 | 24029.7 | 1 | Mus musculus (mouse) | ||
| 2 | B (B) | NP105 TCR beta-chain | polymer | 257 | 29359.9 | 1 | Mus musculus (mouse) | ||
| 3 | C (C) | H-2 class I histocompatibility antigen, D-B alpha chain | polymer | 281 | 32601.3 | 1 | UniProt (P01899) Pfam (PF00129) Pfam (PF07654) | Mus musculus (house mouse) | H-2D(B) |
| 4 | D (D) | Beta-2-microglobulin | polymer | 100 | 11835.6 | 1 | UniProt (P01887) Pfam (PF07654) | Mus musculus (house mouse) | |
| 5 | E (P) | Nucleoprotein peptide | polymer | 9 | 1026.1 | 1 | UniProt (Q9Q0U8) | Influenza A virus | Nucleocapsid protein,Protein N |
| 6 | F, H (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) PubChem (24139) | |||
| 7 | G (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 8 | I, J, K, L, M (B, C, D) | CHLORIDE ION | non-polymer | 35.5 | 5 | Chemie (CL) PubChem (312) | |||
| 9 | N, O, P, Q, R (A, B, C, D, P) | water | water | 18.0 | 44 | Chemie (HOH) |
Sequence modifications
C: 1 - 280 (UniProt: P01899)
D: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Asp 85 | Ala 105 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 98852.5 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 711.8 | |
| All* | Total formula weight | 99564.3 |
