9NR2
Crystal structure of H5 hemagglutinin from the influenza virus A/black swan/Akita/1/2016 with LSTa
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | Hemagglutinin HA1 | polymer | 324 | 36524.4 | 3 | UniProt (A0A1L7N0F8) Pfam (PF00509) | Influenza A virus | |
| 2 | B, D, F (B, D, F) | Hemagglutinin HA2 | polymer | 177 | 20442.5 | 3 | UniProt (A0A1L7N0F8) Pfam (PF00509) | Influenza A virus | |
| 3 | G (G) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose | branched | 471.4 | 1 | In PDB GlyTouCan (G30207PZ) | |||
| 4 | H (H) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 5 | I, J, K, L, M (A, C, E) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 5 | Chemie (NAG) | |||
| 6 | N, O, P, Q, R (A, B, C, E, F) | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A, C, E: 11 - 326 (UniProt: A0A1L7N0F8)
B, D, F: 1 - 174 (UniProt: A0A1L7N0F8)
| PDB | External Database | Details |
|---|---|---|
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ser 175 | - | expression tag |
| Gly 176 | - | expression tag |
| Arg 177 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 170900.8 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1058.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1106.0 | |
| All* | Total formula weight | 173064.8 |
