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9NPY

SARS-CoV-2 nsp1 bound to the Rhinolophus lepidus 40S ribosome (local refinement of the 40S head)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
40S ribosomal protein uS3, RPS3polymer24326715.31Rhinolophus lepidus
2B
(J)
40S ribosomal protein eS10, RPS10polymer16518933.81Rhinolophus lepidus
3C
(L)
40S ribosomal protein eS12, RPS12polymer13214539.01Rhinolophus lepidus
4D
(O)
40S ribosomal protein uS19, RPS15polymer14517076.21Rhinolophus lepidus
5E
(Q)
40S ribosomal protein uS9, RPS16polymer14616477.41Rhinolophus lepidus
6F
(R)
40S ribosomal protein eS17, RPS17polymer13515552.11Rhinolophus lepidus
7G
(S)
40S ribosomal protein uS13, RPS18polymer15217759.81Rhinolophus lepidus
8H
(T)
40S ribosomal protein eS19, RPS19polymer14516104.61Rhinolophus lepidus
9I
(U)
40S ribosomal protein uS10, RPS20polymer11913398.81Rhinolophus lepidus
10J
(Y)
40S ribosomal protein eS25, RPS25polymer12513776.21Rhinolophus lepidus
11K
(b)
40S ribosomal protein eS31, RPS27apolymer15618004.01Rhinolophus lepidus
12L
(c)
40S ribosomal protein eS28, RPS28polymer697855.11Rhinolophus lepidus
13M
(d)
40S ribosomal protein uS14, RPS29polymer566690.81Rhinolophus lepidus
14N
(i)
18S ribosomal RNApolymer1869603611.21Rhinolophus lepidus
15O
(E)
40S ribosomal protein uS7, RPS5polymer20422913.51Rhinolophus lepidus
16P
(g)
RACK1polymer31735115.71Rhinolophus lepidus
17AA, BA, CA, DA, EA...
(i, S, T)
MAGNESIUM IONnon-polymer24.321Chemie (MG)
18S, T
(b, d)
ZINC IONnon-polymer65.42Chemie (ZN)
19OA, PA, QA, RA, SA...
(i, d, E)
POTASSIUM IONnon-polymer39.19Chemie (K)
20AB, BB, CB, DB, EB...
(R, S, T, U, Y...)
waterwater18.0827Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight864523.4
Non-Polymers*Number of molecules32
Total formula weight993.1
All*Total formula weight865516.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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