9NPX
SARS-CoV-2 nsp1 bound to the Rhinolophus lepidus 40S ribosomal subunit (local refinement of the 40S body)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 40S ribosomal protein S2 | polymer | 293 | 31257.4 | 1 | Rhinolophus lepidus | ||
| 2 | B (D) | 40S ribosomal protein S4, X isoform | polymer | 263 | 29640.8 | 1 | Rhinolophus lepidus | ||
| 3 | C (F) | 40S ribosomal protein S6 | polymer | 249 | 28751.9 | 1 | Rhinolophus lepidus | ||
| 4 | D (H) | 40S ribosomal protein S8 | polymer | 208 | 24249.4 | 1 | Rhinolophus lepidus | ||
| 5 | E (I) | 40S ribosomal protein S9 | polymer | 194 | 22641.6 | 1 | Rhinolophus lepidus | ||
| 6 | F (M) | 40S ribosomal protein S13 | polymer | 151 | 17259.4 | 1 | Rhinolophus lepidus | ||
| 7 | G (N) | 40S ribosomal protein S14 | polymer | 151 | 16302.8 | 1 | Rhinolophus lepidus | ||
| 8 | H (P) | 40S ribosomal protein S15a | polymer | 130 | 14865.6 | 1 | Rhinolophus lepidus | ||
| 9 | I (R) | 40S ribosomal protein S17 | polymer | 135 | 15552.1 | 1 | Rhinolophus lepidus | ||
| 10 | J (V) | 40S ribosomal protein S21 | polymer | 84 | 9150.4 | 1 | Rhinolophus lepidus | ||
| 11 | K (W) | 40S ribosomal protein S23 | polymer | 143 | 15844.7 | 1 | Rhinolophus lepidus | ||
| 12 | L (X) | 40S ribosomal protein S24 | polymer | 130 | 15094.9 | 1 | Rhinolophus lepidus | ||
| 13 | M (Z) | 40S ribosomal protein S26 | polymer | 115 | 13047.5 | 1 | Rhinolophus lepidus | ||
| 14 | N (a) | 40S ribosomal protein S27 | polymer | 84 | 9480.2 | 1 | Rhinolophus lepidus | ||
| 15 | O (f) | 60S ribosomal protein L41 | polymer | 25 | 3473.5 | 1 | Rhinolophus lepidus | ||
| 16 | P (h) | 40S ribosomal protein SA | polymer | 295 | 32750.8 | 1 | Rhinolophus lepidus | ||
| 17 | Q (j) | Host translation inhibitor nsp1 | polymer | 180 | 19801.3 | 1 | UniProt (P0DTD1) | Severe acute respiratory syndrome coronavirus 2 | Leader protein,Non-structural protein 1,nsp1 |
| 18 | R (k) | Eukaryotic translation initiation factor 1 | polymer | 113 | 12752.5 | 1 | UniProt (P41567) | Homo sapiens (human) | eIF1,A121,Protein translation factor SUI1 homolog,Sui1iso1 |
| 19 | S (G) | 40S ribosomal protein S7 | polymer | 194 | 22168.9 | 1 | Rhinolophus lepidus | ||
| 20 | T (K) | 40S ribosomal protein S11 | polymer | 158 | 18468.8 | 1 | Rhinolophus lepidus | ||
| 21 | U (e) | 40S ribosomal protein S30 | polymer | 61 | 6857.2 | 1 | Rhinolophus lepidus | ||
| 22 | V (C) | 40S ribosomal protein S3a | polymer | 264 | 30002.1 | 1 | Rhinolophus lepidus | ||
| 23 | W (i) | 18S ribosomal RNA | polymer | 1869 | 603611.2 | 1 | Rhinolophus lepidus | ||
| 24 | X (B) | 40S ribosomal protein uS3, RPS3 | polymer | 243 | 26715.3 | 1 | Rhinolophus lepidus | ||
| 25 | AB, AC, BB, BC, CA... (i, F) | MAGNESIUM ION | non-polymer | 24.3 | 57 | Chemie (MG) | |||
| 26 | AA, GC, HC, IC, JC... (Z, i, N) | POTASSIUM ION | non-polymer | 39.1 | 13 | Chemie (K) | |||
| 27 | BA (Z) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 28 | AD, BD, CD, DD, ED... (W, X, Z, a, f...) | water | water | 18.0 | 1640 | Chemie (HOH) | Rhinolophus lepidus |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 1039740.1 | |
| Non-Polymers* | Number of molecules | 71 |
| Total formula weight | 1959.1 | |
| All* | Total formula weight | 1041699.2 |
