9N8E
Crystal structure of EBOV glycoprotein with modified HR1c (L579P) and HR2 stalk
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Envelope glycoprotein GP1 | polymer | 475 | 51454.6 | 1 | UniProt (Q05320) Pfam (PF01611) | Ebola virus - Mayinga Zaire 1976 | |
| 2 | B (B) | Envelope glycoprotein GP2 | polymer | 165 | 18482.9 | 1 | UniProt (Q05320) Pfam (PF22307) | Ebola virus - Mayinga Zaire 1976 | |
| 3 | C (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | D (D) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G09724ZC) | |||
| 5 | E, F (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
A: 33 - 317 (UniProt: Q05320)
A: 356 - 361 (PDB: 9N8E)
B: 502 - 637 (UniProt: Q05320)
| PDB | External Database | Details |
|---|---|---|
| Ala 42 | Thr 42 | conflict |
B: 502 - 637 (UniProt: Q05320)
| PDB | External Database | Details |
|---|---|---|
| Pro 579 | Leu 579 | engineered mutation |
| Leu 615 | Trp 615 | conflict |
| Ala 638 | - | expression tag |
| Ser 639 | - | expression tag |
| Gly 640 | - | expression tag |
| Tyr 641 | - | expression tag |
| Ile 642 | - | expression tag |
| Pro 643 | - | expression tag |
| Glu 644 | - | expression tag |
| Ala 645 | - | expression tag |
| Pro 646 | - | expression tag |
| Arg 647 | - | expression tag |
| Asp 648 | - | expression tag |
| Gly 649 | - | expression tag |
| Gln 650 | - | expression tag |
| Ala 651 | - | expression tag |
| Tyr 652 | - | expression tag |
| Val 653 | - | expression tag |
| Arg 654 | - | expression tag |
| Lys 655 | - | expression tag |
| Asp 656 | - | expression tag |
| Gly 657 | - | expression tag |
| Glu 658 | - | expression tag |
| Trp 659 | - | expression tag |
| Val 660 | - | expression tag |
| Leu 661 | - | expression tag |
| Leu 662 | - | expression tag |
| Ser 663 | - | expression tag |
| Thr 664 | - | expression tag |
| Phe 665 | - | expression tag |
| Leu 666 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 69937.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1497.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 442.4 | |
| All* | Total formula weight | 71877.4 |
