9N5T
Mycobacterium smegmatis 70S ribosome with small molecule drug MK-7762
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (3) | 50S Ribosomal Protein L27 | polymer | 24 | 2841.4 | 1 | UniProt (A0QTP4) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B (A) | 23S rRNA | polymer | 3120 | 1012140.9 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 3 | C (B) | 5S rRNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 4 | D (BA) | 16S rRNA | polymer | 1528 | 495373.7 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 5 | E (BB) | Conserved domain protein | polymer | 33 | 4164.3 | 1 | UniProt (A0QR10) Pfam (PF08213) | Mycolicibacterium smegmatis MC2 155 | |
| 6 | F (BC) | 30S ribosomal protein S3 | polymer | 275 | 30191.2 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) | Mycolicibacterium smegmatis MC2 155 | |
| 7 | G (BD) | 30S ribosomal protein S4 | polymer | 201 | 23415.8 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) | Mycolicibacterium smegmatis MC2 155 | |
| 8 | H (BE) | 30S Ribosomal Protein S5 | polymer | 214 | 21946.1 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) | Mycolicibacterium smegmatis MC2 155 | Small ribosomal subunit protein uS5 |
| 9 | I (BF) | 30S ribosomal protein S6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A2U9Q0X2) Pfam (PF01250) | Mycolicibacterium smegmatis MC2 155 | |
| 10 | J (BG) | 30S ribosomal protein S7 | polymer | 156 | 17660.4 | 1 | UniProt (A0QS97) Pfam (PF00177) | Mycolicibacterium smegmatis MC2 155 | |
| 11 | K (BH) | 30S Ribosomal Protein S8 | polymer | 132 | 14492.6 | 1 | UniProt (A0QSG3) Pfam (PF00410) | Mycolicibacterium smegmatis MC2 155 | Small ribosomal subunit protein uS8 |
| 12 | L (BI) | 30S ribosomal protein S9 | polymer | 150 | 16794.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) | Mycolicibacterium smegmatis MC2 155 | |
| 13 | M (BJ) | 30S ribosomal protein S10 | polymer | 101 | 11454.3 | 1 | UniProt (A0QSD0) Pfam (PF00338) | Mycolicibacterium smegmatis MC2 155 | |
| 14 | N (BK) | 30S ribosomal protein S11 | polymer | 138 | 14671.8 | 1 | UniProt (A0QSL6) Pfam (PF00411) | Mycolicibacterium smegmatis MC2 155 | |
| 15 | O (BL) | 30S ribosomal protein S12 | polymer | 124 | 13896.4 | 1 | UniProt (A0QS96) Pfam (PF00164) | Mycolicibacterium smegmatis MC2 155 | |
| 16 | P (BM) | 30S ribosomal protein S13 | polymer | 124 | 14249.6 | 1 | UniProt (A0QSL5) Pfam (PF00416) | Mycolicibacterium smegmatis MC2 155 | |
| 17 | Q (BN) | 30S Ribosomal Protein S14 | polymer | 61 | 6976.4 | 1 | UniProt (A0QSG2) Pfam (PF00253) | Mycolicibacterium smegmatis MC2 155 | |
| 18 | R (BO) | 30S Ribosomal Protein S15 | polymer | 89 | 10368.1 | 1 | UniProt (A0QVQ3) Pfam (PF00312) | Mycolicibacterium smegmatis MC2 155 | |
| 19 | S (BP) | 30S ribosomal protein S16 | polymer | 156 | 16795.2 | 1 | UniProt (A0QV37) Pfam (PF00886) | Mycolicibacterium smegmatis MC2 155 | |
| 20 | T (BQ) | 30S ribosomal protein S17 | polymer | 98 | 11127.0 | 1 | UniProt (A0QSE0) Pfam (PF00366) | Mycolicibacterium smegmatis MC2 155 | |
| 21 | U (BR) | 30S Ribosomal Protein S18 | polymer | 84 | 9524.2 | 1 | UniProt (A0R7F7) Pfam (PF01084) | Mycolicibacterium smegmatis MC2 155 | |
| 22 | V (BS) | 30S ribosomal protein S19 | polymer | 93 | 10800.6 | 1 | UniProt (A0QSD5) Pfam (PF00203) | Mycolicibacterium smegmatis MC2 155 | |
| 23 | W (BT) | 30S ribosomal protein S20 | polymer | 86 | 9556.1 | 1 | UniProt (A0R102) Pfam (PF01649) | Mycolicibacterium smegmatis MC2 155 | |
| 24 | X (BV) | 30S Ribosomal Protein S2 | polymer | 277 | 30145.2 | 1 | UniProt (A0QVB8) Pfam (PF00318) | Mycolicibacterium smegmatis MC2 155 | Small ribosomal subunit protein uS2 |
| 25 | Y (BW) | P/P-site Phe-tRNA | polymer | 76 | 24485.5 | 1 | GenBank (1844100912) | Mycolicibacterium smegmatis MC2 155 | |
| 26 | Z (I) | mRNA fragment | polymer | 15 | 4737.9 | 1 | Mycolicibacterium smegmatis MC2 155 | ||
| 27 | AA (C) | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) | Mycolicibacterium smegmatis MC2 155 | |
| 28 | BA (D) | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) | Mycolicibacterium smegmatis MC2 155 | |
| 29 | CA (E) | Large ribosomal subunit protein uL4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) | Mycolicibacterium smegmatis MC2 155 | |
| 30 | DA (F) | 50S Ribosomal Protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) | Mycolicibacterium smegmatis MC2 155 | |
| 31 | EA (G) | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) | Mycolicibacterium smegmatis MC2 155 | |
| 32 | FA (H) | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) | Mycolicibacterium smegmatis MC2 155 | |
| 33 | GA (J) | 50S ribosomal protein L11 | polymer | 142 | 15023.4 | 1 | UniProt (A0QS45) Pfam (PF03946) Pfam (PF00298) | Mycolicibacterium smegmatis MC2 155 | |
| 34 | HA (K) | Large ribosomal subunit protein uL13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) | Mycolicibacterium smegmatis MC2 155 | |
| 35 | IA (L) | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) | Mycolicibacterium smegmatis MC2 155 | |
| 36 | JA (M) | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (A0QSG8) Pfam (PF00828) | Mycolicibacterium smegmatis MC2 155 | |
| 37 | KA (N) | Large ribosomal subunit protein uL16 | polymer | 138 | 15774.2 | 1 | UniProt (A0QSD8) Pfam (PF00252) | Mycolicibacterium smegmatis MC2 155 | 50S ribosomal protein L16 |
| 38 | LA (O) | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) | Mycolicibacterium smegmatis MC2 155 | |
| 39 | MA (P) | Large ribosomal subunit protein uL18 | polymer | 127 | 13711.7 | 1 | UniProt (I7FGD9) Pfam (PF00861) | Mycolicibacterium smegmatis MC2 155 | |
| 40 | NA (Q) | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) | Mycolicibacterium smegmatis MC2 155 | |
| 41 | OA (R) | Large ribosomal subunit protein bL20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) | Mycolicibacterium smegmatis MC2 155 | |
| 42 | PA (S) | Large ribosomal subunit protein bL21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) | Mycolicibacterium smegmatis MC2 155 | |
| 43 | QA (T) | Large ribosomal subunit protein uL22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) | Mycolicibacterium smegmatis MC2 155 | |
| 44 | RA (U) | Large ribosomal subunit protein uL23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) | Mycolicibacterium smegmatis MC2 155 | |
| 45 | SA (V) | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) | Mycolicibacterium smegmatis MC2 155 | |
| 46 | TA (W) | 50S ribosomal protein L25 | polymer | 215 | 22571.1 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) | Mycolicibacterium smegmatis MC2 155 | General stress protein CTC |
| 47 | UA (X) | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) | Mycolicibacterium smegmatis MC2 155 | |
| 48 | VA (Y) | Large ribosomal subunit protein bL28 | polymer | 64 | 6891.0 | 1 | UniProt (I7FJ52) Pfam (PF00830) | Mycolicibacterium smegmatis MC2 155 | |
| 49 | WA (Z) | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) | Mycolicibacterium smegmatis MC2 155 | |
| 50 | XA (a) | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) | Mycolicibacterium smegmatis MC2 155 | |
| 51 | YA (b) | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) | Mycolicibacterium smegmatis MC2 155 | |
| 52 | ZA (c) | 50S Ribosomal Protein L33 | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) | Mycolicibacterium smegmatis MC2 155 | |
| 53 | AB (d) | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) | Mycolicibacterium smegmatis MC2 155 | |
| 54 | BB (e) | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) | Mycolicibacterium smegmatis MC2 155 | |
| 55 | CB (f) | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) | Mycolicibacterium smegmatis MC2 155 | |
| 56 | DB (g) | 50S Ribosomal Protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) | Mycolicibacterium smegmatis MC2 155 | |
| 57 | EB (s) | Nascent peptide | polymer | 5 | 643.8 | 1 | Mycolicibacterium smegmatis MC2 155 | ||
| 58 | AC, AD, AE, AF, AG... (A, B, BA, BM, BR...) | MAGNESIUM ION | non-polymer | 24.3 | 347 | Chemie (MG) | |||
| 59 | VK (A) | methyl ({(5S)-3-[4-(1,1-dioxo-1lambda~6~-thiomorpholin-4-yl)-3,5-difluorophenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)carbamate | non-polymer | 419.4 | 1 | Chemie (A1BWO) | |||
| 60 | JO, LO, RO, SO, TO... (BN, BR, Y, c, f...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 61 | AP, AQ, BP, BQ, CP... (BC, O, BD, P, BE...) | water | water | 18.0 | 7135 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 57 |
| Total formula weight | 2292010.3 | |
| Non-Polymers* | Number of molecules | 354 |
| Total formula weight | 9245.7 | |
| All* | Total formula weight | 2301255.9 |
