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9N5T

Mycobacterium smegmatis 70S ribosome with small molecule drug MK-7762

This is a non-PDB format compatible entry.
Functional Information from GO Data
ChainGOidnamespacecontents
a0006412biological_processtranslation
a0022625cellular_componentcytosolic large ribosomal subunit
b0006412biological_processtranslation
BB0005737cellular_componentcytoplasm
BC0003729molecular_functionmRNA binding
BC0003735molecular_functionstructural constituent of ribosome
BC0006412biological_processtranslation
BC0019843molecular_functionrRNA binding
BC0022627cellular_componentcytosolic small ribosomal subunit
BD0003735molecular_functionstructural constituent of ribosome
BD0006412biological_processtranslation
BD0015935cellular_componentsmall ribosomal subunit
BD0019843molecular_functionrRNA binding
BD0042274biological_processribosomal small subunit biogenesis
BE0005737cellular_componentcytoplasm
BE0006412biological_processtranslation
BE0019843molecular_functionrRNA binding
BE0042254biological_processribosome biogenesis
BF0003735molecular_functionstructural constituent of ribosome
BF0005737cellular_componentcytoplasm
BF0006412biological_processtranslation
BF0019843molecular_functionrRNA binding
BF0070181molecular_functionsmall ribosomal subunit rRNA binding
BG0000049molecular_functiontRNA binding
BG0006412biological_processtranslation
BG0019843molecular_functionrRNA binding
BH0005737cellular_componentcytoplasm
BH0006412biological_processtranslation
BH0019843molecular_functionrRNA binding
BI0003723molecular_functionRNA binding
BI0003735molecular_functionstructural constituent of ribosome
BI0005737cellular_componentcytoplasm
BI0006412biological_processtranslation
BI0015935cellular_componentsmall ribosomal subunit
BJ0000049molecular_functiontRNA binding
BJ0005737cellular_componentcytoplasm
BJ0006412biological_processtranslation
BK0006412biological_processtranslation
BK0019843molecular_functionrRNA binding
BL0000049molecular_functiontRNA binding
BL0006412biological_processtranslation
BL0019843molecular_functionrRNA binding
BM0000049molecular_functiontRNA binding
BM0005829cellular_componentcytosol
BM0006412biological_processtranslation
BM0015935cellular_componentsmall ribosomal subunit
BM0019843molecular_functionrRNA binding
BN0003735molecular_functionstructural constituent of ribosome
BN0006412biological_processtranslation
BN0008270molecular_functionzinc ion binding
BN0015935cellular_componentsmall ribosomal subunit
BN0019843molecular_functionrRNA binding
BO0005737cellular_componentcytoplasm
BO0006412biological_processtranslation
BO0019843molecular_functionrRNA binding
BO0022627cellular_componentcytosolic small ribosomal subunit
BP0003735molecular_functionstructural constituent of ribosome
BP0005737cellular_componentcytoplasm
BP0006412biological_processtranslation
BP0015935cellular_componentsmall ribosomal subunit
BQ0003735molecular_functionstructural constituent of ribosome
BQ0006412biological_processtranslation
BQ0019843molecular_functionrRNA binding
BQ0022627cellular_componentcytosolic small ribosomal subunit
BR0003735molecular_functionstructural constituent of ribosome
BR0006412biological_processtranslation
BR0019843molecular_functionrRNA binding
BR0022627cellular_componentcytosolic small ribosomal subunit
BR0070181molecular_functionsmall ribosomal subunit rRNA binding
BS0000028biological_processribosomal small subunit assembly
BS0003735molecular_functionstructural constituent of ribosome
BS0005737cellular_componentcytoplasm
BS0006412biological_processtranslation
BS0019843molecular_functionrRNA binding
BT0005829cellular_componentcytosol
BT0006412biological_processtranslation
BT0015935cellular_componentsmall ribosomal subunit
BT0019843molecular_functionrRNA binding
BT0070181molecular_functionsmall ribosomal subunit rRNA binding
BV0003735molecular_functionstructural constituent of ribosome
BV0006412biological_processtranslation
BV0022627cellular_componentcytosolic small ribosomal subunit
c0005737cellular_componentcytoplasm
c0006412biological_processtranslation
C0002181biological_processcytoplasmic translation
C0003723molecular_functionRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0006412biological_processtranslation
C0015934cellular_componentlarge ribosomal subunit
C0019843molecular_functionrRNA binding
d0006412biological_processtranslation
D0003735molecular_functionstructural constituent of ribosome
D0006412biological_processtranslation
D0019843molecular_functionrRNA binding
D0022625cellular_componentcytosolic large ribosomal subunit
e0003735molecular_functionstructural constituent of ribosome
e0006412biological_processtranslation
e0015934cellular_componentlarge ribosomal subunit
e0022625cellular_componentcytosolic large ribosomal subunit
E0003735molecular_functionstructural constituent of ribosome
E0006412biological_processtranslation
E0019843molecular_functionrRNA binding
f0005737cellular_componentcytoplasm
f0006412biological_processtranslation
F0000049molecular_functiontRNA binding
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
g0006412biological_processtranslation
G0002181biological_processcytoplasmic translation
G0003723molecular_functionRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0006412biological_processtranslation
G0019843molecular_functionrRNA binding
G0022625cellular_componentcytosolic large ribosomal subunit
H0006412biological_processtranslation
H0019843molecular_functionrRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0006412biological_processtranslation
J0015934cellular_componentlarge ribosomal subunit
J0022625cellular_componentcytosolic large ribosomal subunit
J0070180molecular_functionlarge ribosomal subunit rRNA binding
K0003729molecular_functionmRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0017148biological_processnegative regulation of translation
K0022625cellular_componentcytosolic large ribosomal subunit
L0003735molecular_functionstructural constituent of ribosome
L0006412biological_processtranslation
L0019843molecular_functionrRNA binding
L0022625cellular_componentcytosolic large ribosomal subunit
L0070180molecular_functionlarge ribosomal subunit rRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0006412biological_processtranslation
M0019843molecular_functionrRNA binding
M0022625cellular_componentcytosolic large ribosomal subunit
N0003735molecular_functionstructural constituent of ribosome
N0006412biological_processtranslation
N0019843molecular_functionrRNA binding
N0022625cellular_componentcytosolic large ribosomal subunit
O0003735molecular_functionstructural constituent of ribosome
O0006412biological_processtranslation
O0015934cellular_componentlarge ribosomal subunit
O0022625cellular_componentcytosolic large ribosomal subunit
P0005737cellular_componentcytoplasm
P0006412biological_processtranslation
P0008097molecular_function5S rRNA binding
P0019843molecular_functionrRNA binding
P0022625cellular_componentcytosolic large ribosomal subunit
Q0003735molecular_functionstructural constituent of ribosome
Q0006412biological_processtranslation
Q0022625cellular_componentcytosolic large ribosomal subunit
R0000027biological_processribosomal large subunit assembly
R0019843molecular_functionrRNA binding
S0003735molecular_functionstructural constituent of ribosome
S0005737cellular_componentcytoplasm
S0006412biological_processtranslation
S0019843molecular_functionrRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0006412biological_processtranslation
T0015934cellular_componentlarge ribosomal subunit
T0019843molecular_functionrRNA binding
T0022625cellular_componentcytosolic large ribosomal subunit
U0006412biological_processtranslation
U0019843molecular_functionrRNA binding
V0006412biological_processtranslation
V0019843molecular_functionrRNA binding
W0003723molecular_functionRNA binding
W0006412biological_processtranslation
W0008097molecular_function5S rRNA binding
W0022625cellular_componentcytosolic large ribosomal subunit
X0003735molecular_functionstructural constituent of ribosome
X0006412biological_processtranslation
X0022625cellular_componentcytosolic large ribosomal subunit
Y0006412biological_processtranslation
Z0006412biological_processtranslation
Z0022625cellular_componentcytosolic large ribosomal subunit
Functional Information from PROSITE/UniProt
site_idPS00049
Number of Residues27
DetailsRIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtvkerrra.DGsyikFdeNaaVI
ChainResidueDetails
LALA60-ILE86

site_idPS00050
Number of Residues16
DetailsRIBOSOMAL_L23 Ribosomal protein L23 signature. KRAIVKLAagskpidL
ChainResidueDetails
ULYS80-LEU95

site_idPS00052
Number of Residues27
DetailsRIBOSOMAL_S7 Ribosomal protein S7 signature. SqLvtqLVnkvlleGKKslaerIVygA
ChainResidueDetails
BGSER20-ALA46

site_idPS00053
Number of Residues18
DetailsRIBOSOMAL_S8 Ribosomal protein S8 signature. GvaIISTSsGLLtdrqAA
ChainResidueDetails
BHGLY102-ALA119

site_idPS00054
Number of Residues23
DetailsRIBOSOMAL_S11 Ribosomal protein S11 signature. IrSLqaA.GLeVgtisDvTPqPHN
ChainResidueDetails
BKILE106-ASN128

site_idPS00055
Number of Residues8
DetailsRIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
ChainResidueDetails
BLLYS43-ARG50

site_idPS00056
Number of Residues13
DetailsRIBOSOMAL_S17 Ribosomal protein S17 signature. GDrVsLmEtRPLS
ChainResidueDetails
BQGLY71-SER83

site_idPS00057
Number of Residues24
DetailsRIBOSOMAL_S18 Ribosomal protein S18 signature. IDYkd.TalLrtYISEr.GKIrarRV
ChainResidueDetails
BRILE30-VAL53

site_idPS00211
Number of Residues15
DetailsABC_TRANSPORTER_1 ABC transporters family signature. IAVGEARKLGIPVIA
ChainResidueDetails
BVILE171-ALA185

site_idPS00216
Number of Residues18
DetailsSUGAR_TRANSPORT_1 Sugar transport proteins signature 1. TVDKVDIWGRRrlayeiA
ChainResidueDetails
BFTHR36-ALA53

site_idPS00323
Number of Residues25
DetailsRIBOSOMAL_S19 Ribosomal protein S19 signature. DGRkhvpvfVteamVGhkLGEFapT
ChainResidueDetails
BSASP53-THR77

site_idPS00359
Number of Residues15
DetailsRIBOSOMAL_L11 Ribosomal protein L11 signature. KiIaGTarSMGiTV.E
ChainResidueDetails
JLYS128-GLU142

site_idPS00360
Number of Residues19
DetailsRIBOSOMAL_S9 Ribosomal protein S9 signature. GGGpsGQagAlrlAiARAL
ChainResidueDetails
BIGLY89-LEU107

site_idPS00361
Number of Residues16
DetailsRIBOSOMAL_S10 Ribosomal protein S10 signature. VtrtGAsvvGPVpLPT
ChainResidueDetails
BJVAL29-THR44

site_idPS00362
Number of Residues31
DetailsRIBOSOMAL_S15 Ribosomal protein S15 signature. LteHLkvhKhDhhSrrgLllLvgrrrrLlkY
ChainResidueDetails
BOLEU39-TYR69

site_idPS00464
Number of Residues25
DetailsRIBOSOMAL_L22 Ribosomal protein L22 signature. KriRpRAqGRafrirkrtSHITViV
ChainResidueDetails
TLYS90-VAL114

site_idPS00467
Number of Residues12
DetailsRIBOSOMAL_L2 Ribosomal protein L2 signature. PtvRGVVmNPvD
ChainResidueDetails
CPRO219-ASP230

site_idPS00474
Number of Residues24
DetailsRIBOSOMAL_L3 Ribosomal protein L3 signature. FsdgayvDvtGtSkGKGfaGtmkR
ChainResidueDetails
DPHE106-ARG129

site_idPS00475
Number of Residues31
DetailsRIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGdGkLtvk..VdVtankFSgsAreaItaaG
ChainResidueDetails
MLYS111-GLY141

site_idPS00525
Number of Residues9
DetailsRIBOSOMAL_L6_1 Ribosomal protein L6 signature 1. PDpYKGKGV
ChainResidueDetails
GPRO155-VAL163

site_idPS00527
Number of Residues23
DetailsRIBOSOMAL_S14 Ribosomal protein S14 signature. R.CnkcgrphsvyrkFGLCRiCLR
ChainResidueDetails
BNARG23-ARG45

site_idPS00548
Number of Residues35
DetailsRIBOSOMAL_S3 Ribosomal protein S3 signature. SRsefyreGrVplHt..LradIDyglyeakTtfGriG
ChainResidueDetails
BCSER163-GLY197

site_idPS00579
Number of Residues15
DetailsRIBOSOMAL_L29 Ribosomal protein L29 signature. NNRRLRtVRQEIARV
ChainResidueDetails
ZASN43-VAL57

site_idPS00582
Number of Residues20
DetailsRIBOSOMAL_L33 Ribosomal protein L33 signature. YiTkKNrrndPdrLEikKFC
ChainResidueDetails
cTYR23-CYS42

site_idPS00585
Number of Residues33
DetailsRIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfsFtAlvIVGDgk.GmVGvGygkak.EVpa.AI
ChainResidueDetails
BEGLY53-ILE85

site_idPS00586
Number of Residues12
DetailsRIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. KRgGKVWINIFP
ChainResidueDetails
NLYS59-PRO70

site_idPS00632
Number of Residues25
DetailsRIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRaglArTrrmARqLV
ChainResidueDetails
BDLEU89-VAL113

site_idPS00634
Number of Residues33
DetailsRIBOSOMAL_L30 Ribosomal protein L30 signature. SLrtLgLkKirQsVvrednaqtrgLIntVhhLV
ChainResidueDetails
aSER22-VAL54

site_idPS00646
Number of Residues14
DetailsRIBOSOMAL_S13_1 Ribosomal protein S13 signature. QGlRHrrGlpVRGQ
ChainResidueDetails
BMGLN88-GLN101

site_idPS00651
Number of Residues28
DetailsRIBOSOMAL_L9 Ribosomal protein L9 signature. GaaGdtveVkdGYgrNYLlprglAivaS
ChainResidueDetails
HGLY13-SER40

site_idPS00701
Number of Residues12
DetailsRIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGsGKGspewW
ChainResidueDetails
NARG82-TRP93

site_idPS00732
Number of Residues10
DetailsRIBOSOMAL_S16 Ribosomal protein S16 signature. VkIKLTRLGK
ChainResidueDetails
BPVAL3-LYS12

site_idPS00784
Number of Residues20
DetailsRIBOSOMAL_L34 Ribosomal protein L34 signature. KRTFQpnnrrRarvh.GFrlR
ChainResidueDetails
dLYS5-ARG24

site_idPS00828
Number of Residues26
DetailsRIBOSOMAL_L36 Ribosomal protein L36 signature. CdkCrvIrRhgrVmViCsdp.RHkQrQ
ChainResidueDetails
fCYS11-GLN36

site_idPS00831
Number of Residues15
DetailsRIBOSOMAL_L27 Ribosomal protein L27 signature. GeILvRQRGthfhpG
ChainResidueDetails
XGLY34-GLY48

site_idPS00936
Number of Residues27
DetailsRIBOSOMAL_L35 Ribosomal protein L35 signature. KTHsGAsKRFrrtgtgkivrqkanr.RH
ChainResidueDetails
eLYS5-HIS31

site_idPS00937
Number of Residues17
DetailsRIBOSOMAL_L20 Ribosomal protein L20 signature. KgefRkLWISRINaaaR
ChainResidueDetails
RLYS54-ARG70

site_idPS00962
Number of Residues12
DetailsRIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. MkQLLDSGAHFG
ChainResidueDetails
BVMET6-GLY17

site_idPS01015
Number of Residues16
DetailsRIBOSOMAL_L19 Ribosomal protein L19 signature. VlTrGDVR.RAKLYYLR
ChainResidueDetails
QVAL85-ARG100

site_idPS01048
Number of Residues10
DetailsRIBOSOMAL_S6 Ribosomal protein S6 signature. GrRRLAYeIA
ChainResidueDetails
BFGLY44-ALA53

site_idPS01108
Number of Residues18
DetailsRIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVIsGkdKGak.GkV
ChainResidueDetails
VGLY6-VAL23

site_idPS01143
Number of Residues22
DetailsRIBOSOMAL_L31 Ribosomal protein L31 signature. EVcsqcHPFYTgkqkildsg....GR
ChainResidueDetails
gGLU36-ARG57

site_idPS01167
Number of Residues23
DetailsRIBOSOMAL_L17 Ribosomal protein L17 signature. IkTTepKaRalrpyaEkLIThAK
ChainResidueDetails
OILE34-LYS56

site_idPS01169
Number of Residues23
DetailsRIBOSOMAL_L21 Ribosomal protein L21 signature. IrihKfknKTgyhkrqGHRQqlT
ChainResidueDetails
SILE73-THR95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues68
DetailsDomain: {"description":"KH type-2","evidences":[{"source":"HAMAP-Rule","id":"MF_01309","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues66
DetailsDomain: {"description":"S4 RNA-binding","evidences":[{"source":"HAMAP-Rule","id":"MF_01306","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues63
DetailsDomain: {"description":"S5 DRBM","evidences":[{"source":"HAMAP-Rule","id":"MF_01307","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues56
DetailsCompositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"3-methylthioaspartic acid","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsCross-link: {"description":"Isoglutamyl lysine isopeptide (Lys-Gln) (interchain with Q-Cter in protein Pup)","evidences":[{"source":"PubMed","id":"20094657","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues113
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues15
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues10
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00501","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

254587

PDB entries from 2026-06-03

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