9JKB
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO4 SCF ubiquition ligase complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (C, D) | F-box only protein 4 | polymer | 315 | 36247.1 | 2 | UniProt (Q9UKT5) Pfam (PF00646) | Homo sapiens (human) | |
2 | B (A) | Cullin-1 | polymer | 796 | 91715.4 | 1 | UniProt (Q13616) Pfam (PF00888) Pfam (PF10557) | Homo sapiens (human) | CUL-1 |
3 | C (B) | S-phase kinase-associated protein 1 | polymer | 166 | 18881.1 | 1 | UniProt (P63208) Pfam (PF03931) Pfam (PF01466) | Homo sapiens (human) | Cyclin-A/CDK2-associated protein p19,p19A,Organ of Corti protein 2,OCP-2,Organ of Corti protein II,OCP-II,RNA polymerase II elongation factor-like protein,SIII,Transcription elongation factor B polypeptide 1-like,p19skp1 |
4 | D (R) | E3 ubiquitin-protein ligase RBX1, N-terminally processed | polymer | 96 | 11196.8 | 1 | UniProt (P62877) Pfam (PF12678) | Homo sapiens (human) | E3 ubiquitin-protein transferase RBX1,N-terminally processed |
Sequence modifications
C, D: 75 - 387 (UniProt: Q9UKT5)
A: 2 - 776 (UniProt: Q13616)
B: 1 - 163 (UniProt: P63208)
R: 16 - 108 (UniProt: P62877)
PDB | External Database | Details |
---|---|---|
His 73 | - | expression tag |
Met 74 | - | expression tag |
- | Thr 150 | deletion |
- | Arg 151 | deletion |
- | Arg 152 | deletion |
- | Ala 153 | deletion |
- | Ser 154 | deletion |
- | Lys 155 | deletion |
- | Ser 156 | deletion |
- | Ser 157 | deletion |
- | Arg 158 | deletion |
- | Pro 159 | deletion |
- | Met 160 | deletion |
- | Tyr 161 | deletion |
- | Gly 162 | deletion |
- | Ala 163 | deletion |
- | Val 164 | deletion |
- | Thr 165 | deletion |
- | Ser 166 | deletion |
- | Phe 167 | deletion |
- | Leu 168 | deletion |
- | His 169 | deletion |
- | Ser 170 | deletion |
PDB | External Database | Details |
---|---|---|
Ser -19 | - | expression tag |
Ala -18 | - | expression tag |
Ser -17 | - | expression tag |
Trp -16 | - | expression tag |
Ser -15 | - | expression tag |
His -14 | - | expression tag |
Pro -13 | - | expression tag |
Gln -12 | - | expression tag |
Phe -11 | - | expression tag |
Glu -10 | - | expression tag |
Lys -9 | - | expression tag |
Gly -8 | - | expression tag |
Gly -7 | - | expression tag |
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Gly -4 | - | expression tag |
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
Lys 0 | - | expression tag |
Leu 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 13 | - | expression tag |
His 14 | - | expression tag |
Met 15 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 194287.6 | |
All* | Total formula weight | 194287.6 |