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9IBY

Crystal structure of Zika Virus NS2B-NS3 protease in complex with compound 2

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Genome polyproteinpolymer23024353.12UniProt (A0A140DLX4)Zika virus
2C, E
(A, B)
1-[3-[[5-(4,6-dimethylpyrimidin-5-yl)pyridin-2-yl]methyl]-1-oxa-2,3$l^{4}-diazacyclopenta-2,4-dien-5-yl]-3-[3-(trifluoromethyl)phenyl]ureanon-polymer470.42Chemie (A1I16)
3D, F, G
(A, B)
ACETIC ACIDnon-polymer60.13Chemie (ACY)
4H, I
(A, B)
waterwater18.054Chemie (HOH)
Sequence modifications
A, B: 49 - 990 (UniProt: A0A140DLX4)
PDBExternal DatabaseDetails
Gly 45-expression tag
Ser 46-expression tag
His 47-expression tag
Met 48-expression tag
A, B: 1001 - 1170 (UniProt: A0A140DLX4)
PDBExternal DatabaseDetails
Ala 991-linker
Gly 992-linker
Gly 993-linker
Gly 994-linker
Gly 995-linker
Ser 996-linker
Gly 997-linker
Gly 998-linker
Gly 999-linker
Gly 1000-linker
Gly 1029Arg 1531conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48706.2
Non-Polymers*Number of molecules5
Total formula weight1121.0
All*Total formula weight49827.2
*Water molecules are not included.

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PDB entries from 2025-12-03

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