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9HMC

Crystal structure of PDE6D in complex with compound 5e

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit deltapolymer15618269.92UniProt (O43924)Homo sapiens (human)GMP-PDE delta,Protein p17
2C, F
(A, B)
4-[3,4-dimethyl-2-(4-methylphenyl)-7-oxidanylidene-pyrazolo[3,4-d]pyridazin-6-yl]-~{N}-heptyl-~{N}-(piperidin-4-ylmethyl)butane-1-sulfonamidenon-polymer584.82Chemie (A1IWC)
3D, E
(A)
GLYCEROLnon-polymer92.12Chemie (GOL)
4G
(B)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5H, I
(A, B)
waterwater18.0147Chemie (HOH)
Sequence modifications
A, B: 1 - 150 (UniProt: O43924)
PDBExternal DatabaseDetails
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight36539.8
Non-Polymers*Number of molecules5
Total formula weight1459.9
All*Total formula weight37999.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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