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9HLD

TRPML1 in complex with compound 13

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Mucolipin-1polymer62870518.54UniProt (Q9GZU1)
Pfam (PF21381)
Pfam (PF08016)
Homo sapiens (human)ML1,MG-2,Mucolipidin,Transient receptor potential channel mucolipin 1,TRPML1
2E, F, G, H
(E, F, G, H)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
3HA, I, Q, Y
(D, A, B, C)
N-OCTANEnon-polymer114.24Chemie (OCT)
4IA, J, R, Z
(D, A, B, C)
DODECANEnon-polymer170.34Chemie (D12)
5AA, JA, K, S
(C, D, A, B)
DECANEnon-polymer142.34Chemie (D10)
6BA, KA, L, T
(C, D, A, B)
Octadecanenon-polymer254.54Chemie (8K6)
7CA, EA, LA, M, NA...
(C, D, A, B)
HEXANEnon-polymer86.28Chemie (HEX)
8DA, MA, N, V
(C, D, A, B)
(2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctanoatenon-polymer746.64Chemie (EUJ)
9FA, GA, P, X
(C, D, A, B)
1-[(8R,9S,13S,14S,17S)-13-methyl-17-oxidanyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-yl]ethanonenon-polymer298.44Chemie (A1IV6)
10OA, PA, QA, RA
(A, B, C, D)
waterwater18.0328Chemie (HOH)
Sequence modifications
A, B, C, D: 2 - 580 (UniProt: Q9GZU1)
PDBExternal DatabaseDetails
Met -47-initiating methionine
His -46-expression tag
His -45-expression tag
His -44-expression tag
His -43-expression tag
His -42-expression tag
His -41-expression tag
His -40-expression tag
His -39-expression tag
Gly -38-expression tag
Gly -37-expression tag
Ser -36-expression tag
Asp -35-expression tag
Tyr -34-expression tag
Lys -33-expression tag
Asp -32-expression tag
His -31-expression tag
Asp -30-expression tag
Gly -29-expression tag
Asp -28-expression tag
Tyr -27-expression tag
Lys -26-expression tag
Asp -25-expression tag
His -24-expression tag
Asp -23-expression tag
Ile -22-expression tag
Asp -21-expression tag
Tyr -20-expression tag
Lys -19-expression tag
Asp -18-expression tag
Asp -17-expression tag
Asp -16-expression tag
Asp -15-expression tag
Lys -14-expression tag
Gly -13-expression tag
Gly -12-expression tag
Ser -11-expression tag
Gly -10-expression tag
Gly -9-expression tag
Ser -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Pro 0-expression tag
Gly 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight282073.9
BranchedNumber of molecules4
Total formula weight1697.6
Non-Polymers*Number of molecules32
Total formula weight7594.7
All*Total formula weight291366.2
*Water molecules are not included.

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PDB entries from 2025-07-30

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