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9HEO

Open-state RyR1 in 0.05% POPC micelles, in complex with a nanobody and FKBP

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, G, J
(A, C, G, J)
Ryanodine receptor 1polymer5027564931.84UniProt (P11716)
Pfam (PF08709)
Pfam (PF01365)
Pfam (PF02026)
Pfam (PF08454)
Pfam (PF06459)
Pfam (PF00520)
Pfam (PF02815)
Pfam (PF00622)
Pfam (PF21119)
Oryctolagus cuniculus (rabbit)RYR-1,RyR1,Skeletal muscle calcium release channel,Skeletal muscle ryanodine receptor,Skeletal muscle-type ryanodine receptor,Type 1 ryanodine receptor
2B, D, H, K
(B, D, H, K)
Nanobody 9657polymer12613783.14Lama glama
3E, F, I, L
(E, F, I, L)
Peptidyl-prolyl cis-trans isomerase FKBP1Bpolymer10711667.34UniProt (Q8HYX6)
Pfam (PF00254)
Oryctolagus cuniculus (rabbit)PPIase FKBP1B,12.6 kDa FK506-binding protein,12.6 kDa FKBP,FKBP-12.6,FK506-binding protein 1B,FKBP-1B,Immunophilin FKBP12.6,Rotamase
4HB, HC, LA, M
(G, J, C, A)
ZINC IONnon-polymer65.44Chemie (ZN)
5IB, IC, MA, N
(G, J, C, A)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.24Chemie (ATP)
6JB, JC, NA, O
(G, J, C, A)
CAFFEINEnon-polymer194.24Chemie (CFF)
7KB, KC, OA, P
(G, J, C, A)
CALCIUM IONnon-polymer40.14Chemie (CA)
8AA, AB, AC, BA, BB...
(A, C, J, G)
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphatenon-polymer760.172Chemie (POV)
Sequence modifications
E, F, I, L: 1 - 107 (UniProt: Q8HYX6)
PDBExternal DatabaseDetails
Asp 100Gly 101conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight2361528.7
Non-Polymers*Number of molecules88
Total formula weight57952.9
All*Total formula weight2419481.6
*Water molecules are not included.

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PDB entries from 2025-12-24

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