9H90
Cryo-EM structure of the Vibrio natrigens 30S ribosomal subunit in complex with spectinomycin.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (u) | 30S ribosomal protein S21 | polymer | 71 | 8512.1 | 1 | UniProt (A0AAN1CUP2) Pfam (PF01165) | Vibrio natriegens | |
| 2 | B (C) | 30S ribosomal protein S3 | polymer | 232 | 25598.9 | 1 | UniProt (A0AAN0Y138) Pfam (PF07650) Pfam (PF00189) | Vibrio natriegens | |
| 3 | C (G) | Small ribosomal subunit protein uS7 | polymer | 156 | 17765.8 | 1 | UniProt (A0AAN0Y3T9) Pfam (PF00177) | Vibrio natriegens | |
| 4 | D (o) | 30S ribosomal protein S15 | polymer | 89 | 10084.7 | 1 | UniProt (A0AAN0Y3D6) Pfam (PF00312) | Vibrio natriegens | |
| 5 | E (h) | 30S ribosomal protein S8 | polymer | 130 | 14027.6 | 1 | UniProt (A0AAN0Y0S4) Pfam (PF00410) | Vibrio natriegens | |
| 6 | F (f) | 30S ribosomal protein S6 | polymer | 129 | 14994.1 | 1 | UniProt (A0AAN0Y4F0) Pfam (PF01250) | Vibrio natriegens | |
| 7 | G (e) | 30S ribosomal protein S5 | polymer | 167 | 17609.3 | 1 | UniProt (A0AAN1CUS4) Pfam (PF03719) Pfam (PF00333) | Vibrio natriegens | |
| 8 | H (d) | 30S ribosomal protein S4 | polymer | 206 | 23392.1 | 1 | UniProt (A0AAN0XZY8) Pfam (PF00163) Pfam (PF01479) | Vibrio natriegens | |
| 9 | I (I) | 30S ribosomal protein S9 | polymer | 130 | 14638.9 | 1 | UniProt (A0AAN0Y103) Pfam (PF00380) | Vibrio natriegens | |
| 10 | J (a) | 16S ribosomal RNA | polymer | 1544 | 500566.6 | 1 | Vibrio natriegens | ||
| 11 | K (t) | 30S ribosomal protein S20 | polymer | 86 | 9590.4 | 1 | UniProt (A0AAN1CUQ1) Pfam (PF01649) | Vibrio natriegens | |
| 12 | L (r) | 30S ribosomal protein S18 | polymer | 75 | 8861.3 | 1 | UniProt (A0AAN0Y440) Pfam (PF01084) | Vibrio natriegens | |
| 13 | M (q) | 30S ribosomal protein S17 | polymer | 84 | 9605.2 | 1 | UniProt (A0AAN0XZY2) Pfam (PF00366) | Vibrio natriegens | |
| 14 | N (p) | 30S ribosomal protein S16 | polymer | 82 | 9080.4 | 1 | UniProt (A0AAN0Y460) Pfam (PF00886) | Vibrio natriegens | |
| 15 | O (l) | 30S ribosomal protein S12 | polymer | 124 | 13738.0 | 1 | UniProt (A0AAN0Y4G9) Pfam (PF00164) | Vibrio natriegens | |
| 16 | P (k) | 30S ribosomal protein S11 | polymer | 129 | 13916.0 | 1 | UniProt (A0AAN0Y004) Pfam (PF00411) | Vibrio natriegens | |
| 17 | Q (D) | 30S ribosomal protein S14 | polymer | 101 | 11481.4 | 1 | UniProt (A0AAN0Y0L1) Pfam (PF00253) | Vibrio natriegens | |
| 18 | R (J) | 30S ribosomal protein S10 | polymer | 103 | 11741.7 | 1 | UniProt (A0AAN0Y0R4) Pfam (PF00338) | Vibrio natriegens | |
| 19 | S (a) | SPECTINOMYCIN | non-polymer | 332.4 | 1 | Chemie (SCM) PubChem (2021) PubChem (5702260) PubChem (6604362) PubChem (6604671) PubChem (7048798) PubChem (7067793) PubChem (11865469) PubChem (11865471) PubChem (11865473) PubChem (11865475) PubChem (15558351) PubChem (16757734) PubChem (25008033) PubChem (25008035) PubChem (25008036) PubChem (44120110) PubChem (53298596) PubChem (15541) PubChem (71752167) PubChem (7048796) PubChem (124771612) PubChem (59098412) PubChem (71306861) PubChem (71774977) PubChem (73265186) PubChem (75534862) PubChem (91393002) PubChem (93474248) PubChem (95566334) PubChem (95566335) PubChem (95566336) PubChem (97050499) PubChem (117072393) PubChem (117986677) PubChem (124304444) PubChem (124352394) PubChem (124771609) PubChem (124771610) PubChem (124771611) PubChem (126963502) PubChem (129010452) PubChem (132067192) PubChem (134693173) PubChem (137704781) PubChem (137705153) PubChem (140326108) PubChem (146157559) PubChem (146247383) PubChem (162973090) PubChem (162973091) PubChem (164773707) | |||
| 20 | T (a) | water | water | 18.0 | 4 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 18 |
| Total formula weight | 735204.5 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 332.4 | |
| All* | Total formula weight | 735536.8 |
