9H6A
Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | tRNA(fMet)-specific endonuclease VapC | polymer | 132 | 14818.1 | 2 | UniProt (Q84A22) Pfam (PF01850) | Escherichia coli KLY | RNase VapC,Toxin VapC |
| 2 | B, D (B, D) | Antitoxin | polymer | 96 | 10934.1 | 2 | UniProt (Q7B3V0) UniProt (by SIFTS) (P18355) | Escherichia coli KLY | VapB protein (Antitoxin to VapC) |
Sequence modifications
B, D: 1 - 75 (UniProt: Q7B3V0)
| PDB | External Database | Details |
|---|---|---|
| Met -20 | - | initiating methionine |
| Gly -19 | - | expression tag |
| Ser -18 | - | expression tag |
| Ser -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Gly -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Asn -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Tyr -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Gly -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 51504.3 | |
| All* | Total formula weight | 51504.3 |






