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9H39

Crystal structure of Lotus japonicus CHIP13 extracellular domain in complex with a nanobody

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
LysM type receptor kinasepolymer22725008.72UniProt (D3KU00)
Pfam (PF01476)
Lotus japonicus
2C, D
(C, D)
anti-LYS13 VHHpolymer12814507.12Lama glama
3E
(N)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.51In PDB
GlyTouCan (G15407YE)
4F, G
(E, M)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
5H
(F)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched732.71In PDB
GlyTouCan (G32152BH)
6I
(G)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched570.51In PDB
GlyTouCan (G21290RB)
7J, K
(B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
8L, M, N, O
(A, B, C, D)
waterwater18.0582Chemie (HOH)
Sequence modifications
A, B: 33 - 253 (UniProt: D3KU00)
PDBExternal DatabaseDetails
His 254-expression tag
His 255-expression tag
His 256-expression tag
His 257-expression tag
His 258-expression tag
His 259-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight79031.6
BranchedNumber of molecules5
Total formula weight2738.6
Non-Polymers*Number of molecules2
Total formula weight442.4
All*Total formula weight82212.6
*Water molecules are not included.

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PDB entries from 2025-12-24

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