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9H30

VHL:ElonginC:ElonginB-PROTAC4 complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
von Hippel-Lindau disease tumor suppressorpolymer19722503.51UniProt (P40337)Homo sapiens (human)Protein G7,pVHL
2B
(C)
Elongin-Cpolymer9710974.61UniProt (Q15369)Homo sapiens (human)EloC,Elongin 15 kDa subunit,RNA polymerase II transcription factor SIII subunit C,SIII p15,Transcription elongation factor B polypeptide 1
3C
(D)
Elongin-Bpolymer10411748.41UniProt (Q15370)Homo sapiens (human)EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2
4D
(B)
N-[5-(1-{2-[4-({[(1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1~10,14~.0~3,5~]hexacosa-10(26),11,13,16,18-pentaen-6-yl]oxy}carbonyl)phenyl]ethyl}-1H-1,2,3-triazol-4-yl)pentanoyl]-3-methyl-D-valyl-(4R)-4-hydroxy-N-{[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl}-L-prolinamidenon-polymer1276.91Chemie (A1ISE)
5E, F, G
(B, C, D)
waterwater18.025Chemie (HOH)
Sequence modifications
B: 54 - 213 (UniProt: P40337)
PDBExternal DatabaseDetails
Met 17-initiating methionine
Asn 18-expression tag
Thr 19-expression tag
Ile 20-expression tag
His 21-expression tag
His 22-expression tag
His 23-expression tag
His 24-expression tag
His 25-expression tag
His 26-expression tag
Asn 27-expression tag
Thr 28-expression tag
Ser 29-expression tag
Gly 30-expression tag
Ser 31-expression tag
Gly 32-expression tag
Gly 33-expression tag
Gly 34-expression tag
Gly 35-expression tag
Gly 36-expression tag
Arg 37-expression tag
Leu 38-expression tag
Val 39-expression tag
Pro 40-expression tag
Arg 41-expression tag
Gly 42-expression tag
Ser 43-expression tag
Met 44-expression tag
Ser 45-expression tag
Glu 46-expression tag
Asn 47-expression tag
Leu 48-expression tag
Tyr 49-expression tag
Phe 50-expression tag
Gln 51-expression tag
Gly 52-expression tag
Ser 53-expression tag
C: 17 - 112 (UniProt: Q15369)
PDBExternal DatabaseDetails
Met 16-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight45226.5
Non-Polymers*Number of molecules1
Total formula weight1276.9
All*Total formula weight46503.4
*Water molecules are not included.

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PDB entries from 2025-10-29

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