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9H0B

Crystal structure of the Porcine Hemagglutinating Encephalomyelitis Virus (PHEV) receptor binding domain in complex with porcine DPEP1.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(B, C)
Dipeptidase 1polymer37441030.02UniProt (P22412)
Pfam (PF01244)
Sus scrofa (pig)Beta-lactamase,Microsomal dipeptidase,Renal dipeptidase
2B, D
(A, D)
Spike glycoproteinpolymer28431128.82UniProt (Q2QKN3)
Pfam (PF09408)
Porcine hemagglutinating encephalomyelitis virusS glycoprotein,E2,Peplomer protein
3E, F, G, H
(E, F, G, H)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched570.54In PDB
GlyTouCan (G21290RB)
4AA, BA, I, J, K...
(D, B, C)
ZINC IONnon-polymer65.416Chemie (ZN)
5R, S, Y, Z
(A, D)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)
6CA, DA, EA, FA
(B, A, C, D)
waterwater18.0506Chemie (HOH)
Sequence modifications
B, C: 17 - 385 (UniProt: P22412)
PDBExternal DatabaseDetails
Asp 386-expression tag
Asp 387-expression tag
Asp 388-expression tag
Asp 389-expression tag
Lys 390-expression tag
A, D: 327 - 605 (UniProt: Q2QKN3)
PDBExternal DatabaseDetails
Asp 606-expression tag
Asp 607-expression tag
Asp 608-expression tag
Asp 609-expression tag
Lys 610-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight144317.5
BranchedNumber of molecules4
Total formula weight2282.2
Non-Polymers*Number of molecules20
Total formula weight1931.4
All*Total formula weight148531.0
*Water molecules are not included.

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PDB entries from 2025-08-13

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