9GY3
Crystal structure of CRBNmidi in complex with (S)-dHTC1
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, C) | Protein cereblon | polymer | 329 | 37478.8 | 2 | UniProt (Q96SW2) Pfam (PF02190) Pfam (PF03226) | Homo sapiens (human) | |
| 2 | C, E (A, C) | 2-[3-[2-[4-[[(5~{S})-1,3-bis(oxidanylidene)-2,7-diazaspiro[4.4]nonan-7-yl]sulfonylamino]piperidin-1-yl]ethylcarbamoyl]phenyl]-~{N}-cyclobutyl-imidazo[1,2-a]pyridine-6-carboxamide | non-polymer | 676.8 | 2 | Chemie (A1IQT) | |||
| 3 | D, F (A, C) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 4 | G, H (A, C) | water | water | 18.0 | 67 | Chemie (HOH) |
Sequence modifications
A, C: 41 - 187 (UniProt: Q96SW2)
A, C: 249 - 426 (UniProt: Q96SW2)
| PDB | External Database | Details |
|---|---|---|
| Ser 40 | - | expression tag |
| Ile 78 | Cys 78 | engineered mutation |
| Val 92 | Ile 92 | engineered mutation |
| Asn 116 | Lys 116 | engineered mutation |
| Glu 134 | Gln 134 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly 188 | - | linker |
| Ser 189 | - | linker |
| Gly 190 | - | linker |
| Trp 283 | Arg 283 | engineered mutation |
| Asn 287 | Cys 287 | engineered mutation |
| Ser 293 | Val 293 | engineered mutation |
| Asp 302 | Gly 302 | engineered mutation |
| Arg 342 | Leu 342 | engineered mutation |
| Glu 343 | Cys 343 | engineered mutation |
| Ile 359 | Thr 359 | engineered mutation |
| Ile 423 | Leu 423 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 74957.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1484.4 | |
| All* | Total formula weight | 76442.0 |






