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9GV9

Structure of Heparinase I from Bacteroides eggerthii in complex with calcium cofactor and delta-UA(1-4)Glc 3, 6, N-Sulphated disaccharide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(B, A)
Heparin lyase Ipolymer38243574.32UniProt (E5WZ15)Bacteroides eggerthii
2C, D
(E, G)
4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosebranched577.52In PDB
3E, F, G, H, Q...
(B, A)
ACETATE IONnon-polymer59.06Chemie (ACT)
PubChem (175)
4I, J, K, L, M...
(B, A)
SULFATE IONnon-polymer96.115Chemie (SO4)
5AA, P
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
PubChem (271)
6BA, CA
(B, A)
waterwater18.0578Chemie (HOH)
Sequence modifications
B, A: 2 - 374 (UniProt: E5WZ15)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Leu 375-expression tag
Glu 376-expression tag
His 377-expression tag
His 378-expression tag
His 379-expression tag
His 380-expression tag
His 381-expression tag
His 382-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight87148.7
BranchedNumber of molecules2
Total formula weight1154.9
Non-Polymers*Number of molecules23
Total formula weight1875.4
All*Total formula weight90179.0
*Water molecules are not included.

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PDB entries from 2026-03-25

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