9GD1

Structure of Chd1 bound to a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, E, K, O (A, E, K, O)	Histone H3.2	polymer	136	15435.1	4	UniProt (P84233) Pfam (PF00125)	Xenopus laevis (African clawed frog)
2	B, F, L, P (B, F, L, P)	Histone H4	polymer	103	11394.4	4	UniProt (P62799) Pfam (PF15511)	Xenopus laevis (African clawed frog)
3	C, G, M (C, G, M)	Histone H2A type 1	polymer	130	14109.4	3	UniProt (P06897) Pfam (PF00125) Pfam (PF16211)	Xenopus laevis (African clawed frog)
4	D, H, N (D, H, N)	Histone H2B 1.1	polymer	123	13655.9	3	UniProt (P02281) Pfam (PF00125)	Xenopus laevis (African clawed frog)	H2B1.1
5	I (I)	DNA (261-MER)	polymer	261	80159.9	1		synthetic construct
6	J (J)	DNA (261-MER)	polymer	261	81036.5	1		synthetic construct
7	Q (W)	Chromo domain-containing protein 1	polymer	1468	168496.6	1	UniProt (P32657) Pfam (PF13907) Pfam (PF00385) Pfam (PF00176) Pfam (PF00271) Pfam (PF18196)	Saccharomyces cerevisiae S288C	ATP-dependent helicase CHD1
8	R (W)	ADENOSINE-5'-DIPHOSPHATE	non-polymer		427.2	1	Chemie (ADP)
9	S (W)	BERYLLIUM TRIFLUORIDE ION	non-polymer		66.0	1	Chemie (BEF)
10	T (W)	MAGNESIUM ION	non-polymer		24.3	1	Chemie (MG)

Sequence modifications

A, E, K, O: 0 - 135 (UniProt: P84233)

PDB	External Database	Details
Ala 102	Gly 103	conflict

C, G, M: 0 - 129 (UniProt: P06897)

PDB	External Database	Details
Arg 99	Gly 100	conflict
Ser 123	Ala 124	conflict

D, H, N: 1 - 122 (UniProt: P02281)

PDB	External Database	Details
Met 0	-	initiating methionine
Thr 29	Ser 33	conflict

Contents of the asymmetric unit

Polymers	Number of chains	17
	Total formula weight	520307.4
Non-Polymers*	Number of molecules	3
	Total formula weight	517.5
All*	Total formula weight	520825.0

*Water molecules are not included.