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9GD0

Structure of a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, K, O
(A, E, K, O)
Histone H3.2polymer13615435.14UniProt (P84233)
Pfam (PF00125)
Xenopus laevis (African clawed frog)
2B, F, L, P
(B, F, L, P)
Histone H4polymer10311394.44UniProt (P62799)
Pfam (PF15511)
Xenopus laevis (African clawed frog)
3C, G, M
(C, G, M)
Histone H2A type 1polymer13014109.43UniProt (P06897)
Pfam (PF00125)
Pfam (PF16211)
Xenopus laevis (African clawed frog)
4D, H, N
(D, H, N)
Histone H2B 1.1polymer12313655.93UniProt (P02281)
Pfam (PF00125)
Xenopus laevis (African clawed frog)H2B1.1
5I
(I)
DNA (250-MER)polymer25076740.81synthetic construct
6J
(J)
DNA (250-MER)polymer25077657.41synthetic construct
Sequence modifications
A, E, K, O: 0 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103conflict
C, G, M: 0 - 129 (UniProt: P06897)
PDBExternal DatabaseDetails
Arg 99Gly 100conflict
Ser 123Ala 124conflict
D, H, N: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Thr 29Ser 33conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight345012.5
All*Total formula weight345012.5
*Water molecules are not included.

239149

PDB entries from 2025-07-23

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