9GD0
Structure of a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, K, O (A, E, K, O) | Histone H3.2 | polymer | 136 | 15435.1 | 4 | UniProt (P84233) Pfam (PF00125) | Xenopus laevis (African clawed frog) | |
2 | B, F, L, P (B, F, L, P) | Histone H4 | polymer | 103 | 11394.4 | 4 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
3 | C, G, M (C, G, M) | Histone H2A type 1 | polymer | 130 | 14109.4 | 3 | UniProt (P06897) Pfam (PF00125) Pfam (PF16211) | Xenopus laevis (African clawed frog) | |
4 | D, H, N (D, H, N) | Histone H2B 1.1 | polymer | 123 | 13655.9 | 3 | UniProt (P02281) Pfam (PF00125) | Xenopus laevis (African clawed frog) | H2B1.1 |
5 | I (I) | DNA (250-MER) | polymer | 250 | 76740.8 | 1 | synthetic construct | ||
6 | J (J) | DNA (250-MER) | polymer | 250 | 77657.4 | 1 | synthetic construct |
Sequence modifications
A, E, K, O: 0 - 135 (UniProt: P84233)
C, G, M: 0 - 129 (UniProt: P06897)
D, H, N: 1 - 122 (UniProt: P02281)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | conflict |
PDB | External Database | Details |
---|---|---|
Arg 99 | Gly 100 | conflict |
Ser 123 | Ala 124 | conflict |
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Thr 29 | Ser 33 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 16 |
Total formula weight | 345012.5 | |
All* | Total formula weight | 345012.5 |