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9F6E

Human DNA polymerase epsilon bound to DNA and PCNA (ajar conformation)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase epsilon catalytic subunit Apolymer1200138137.61UniProt (Q07864)
Pfam (PF03104)
Pfam (PF22634)
Homo sapiens (human)3'-5' exodeoxyribonuclease,DNA polymerase II subunit A
2B, C, D
(B, C, D)
Proliferating cell nuclear antigenpolymer26128795.83UniProt (P12004)
Pfam (PF00705)
Pfam (PF02747)
Homo sapiens (human)PCNA,Cyclin
3E
(P)
DNA nascent strandpolymer247074.61synthetic construct
4F
(T)
DNA template strandpolymer3812033.71synthetic construct
5G
(A)
IRON/SULFUR CLUSTERnon-polymer351.61Chemie (SF4)
6H
(A)
2',3'-dideoxyadenosine triphosphatenon-polymer475.21Chemie (DDS)
Sequence modifications
A: 1 - 1200 (UniProt: Q07864)
PDBExternal DatabaseDetails
Ala 275Asp 275engineered mutation
Ala 277Glu 277engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight243633.1
Non-Polymers*Number of molecules2
Total formula weight826.8
All*Total formula weight244460.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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