9E9V
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, E (A, B, E) | single-stranded DNA cytosine deaminase | polymer | 183 | 21768.2 | 3 | UniProt (B7T0U6) Pfam (PF18771) | Pan troglodytes (chimpanzee) | |
| 2 | C, F (D, H) | RNA (5'-R(P*CP*CP*CP*GP*GP*CP*A)-3') | polymer | 10 | 3160.0 | 2 | Escherichia coli BL21(DE3) | ||
| 3 | D, G (C, G) | RNA (5'-R(P*GP*CP*CP*GP*GP*G)-3') | polymer | 9 | 2887.8 | 2 | Escherichia coli BL21(DE3) | ||
| 4 | H (n) | Elongin-C | polymer | 96 | 10843.4 | 1 | UniProt (Q15369) Pfam (PF03931) | Homo sapiens (human) | EloC, Elongin 15 kDa subunit, RNA polymerase II transcription factor SIII subunit C, SIII p15, Transcription elongation factor B polypeptide 1 |
| 5 | I (m) | Elongin-B | polymer | 102 | 11488.0 | 1 | UniProt (Q15370) Pfam (PF00240) | Homo sapiens (human) | EloB,Elongin 18 kDa subunit,RNA polymerase II transcription factor SIII subunit B,SIII p18,Transcription elongation factor B polypeptide 2 |
| 6 | J, L (p, t) | Virion infectivity factor | polymer | 176 | 20982.2 | 2 | UniProt (P12504) | Human immunodeficiency virus 1 | Vif,SOR protein |
| 7 | K, M (o, s) | Core-binding factor subunit beta | polymer | 170 | 20272.6 | 2 | UniProt (Q13951) Pfam (PF02312) | Homo sapiens (human) | CBF-beta,Polyomavirus enhancer-binding protein 2 beta subunit,PEA2-beta,PEBP2-beta,SL3-3 enhancer factor 1 subunit beta,SL3/AKV core-binding factor beta subunit |
| 8 | N, O, P, Q (A, B, E, p) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 182241.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 261.6 | |
| All* | Total formula weight | 182502.8 |
