9E93
Structural Insights into HIV-1 Vif-Mediated Ubiquitination and Degradation of APOBEC3H
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (C, G) | RNA (5'-R(P*UP*GP*CP*CP*GP*GP*GP*UP*A)-3') | polymer | 9 | 2887.8 | 2 | Escherichia coli BL21(DE3) | ||
| 2 | B, E (D, H) | RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3') | polymer | 10 | 3160.0 | 2 | Escherichia coli BL21(DE3) | ||
| 3 | C, F (A, E) | single-stranded DNA cytosine deaminase | polymer | 185 | 21912.3 | 2 | UniProt (B7T0U6) | Pan troglodytes (chimpanzee) | |
| 4 | G, I (o, s) | Core-binding factor subunit beta | polymer | 170 | 20272.6 | 2 | UniProt (Q13951) | Homo sapiens (human) | CBF-beta,Polyomavirus enhancer-binding protein 2 beta subunit,PEA2-beta,PEBP2-beta,SL3-3 enhancer factor 1 subunit beta,SL3/AKV core-binding factor beta subunit |
| 5 | H, J (p, t) | Virion infectivity factor | polymer | 176 | 20982.2 | 2 | UniProt (P12504) | Human immunodeficiency virus 1 | Vif,SOR protein |
| 6 | K, L, M, N (A, E, p, t) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) |
Sequence modifications
A, E: 1 - 183 (UniProt: B7T0U6)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 138429.8 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 261.6 | |
| All* | Total formula weight | 138691.5 |
