9E7U
Cryo-EM structure of NOT1:NOT8:PieF
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Ubiquitin-like protein SMT3,CCR4-NOT transcription complex subunit 8 | polymer | 418 | 47754.7 | 1 | UniProt (Q12306) UniProt (Q9UFF9) Pfam (PF00240) Pfam (PF04857) | Homo sapiens (human) | CAF1-like protein,CALIFp,CAF2,CCR4-associated factor 8,Caf1b |
| 2 | B (A) | Dot/Icm T4SS effector PieF | polymer | 150 | 16568.5 | 1 | UniProt (A0AAN5PHN6) | Legionella pneumophila | |
| 3 | C (B) | CCR4-NOT transcription complex subunit 1 | polymer | 254 | 29237.8 | 1 | UniProt (A5YKK6) Pfam (PF16415) | Homo sapiens (human) | CCR4-associated factor 1,Negative regulator of transcription subunit 1 homolog,NOT1H,hNOT1 |
| 4 | D (C) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 5 | E, F (C, A) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence modifications
C: -111 - -17 (UniProt: Q12306)
C: 1 - 292 (UniProt: Q9UFF9)
A: 1 - 125 (UniProt: A0AAN5PHN6)
B: 1093 - 1317 (UniProt: A5YKK6)
| PDB | External Database | Details |
|---|---|---|
| Met -125 | - | expression tag |
| Gly -124 | - | expression tag |
| Ser -123 | - | expression tag |
| Ser -122 | - | expression tag |
| His -121 | - | expression tag |
| His -120 | - | expression tag |
| His -119 | - | expression tag |
| His -118 | - | expression tag |
| His -117 | - | expression tag |
| His -116 | - | expression tag |
| Ser -115 | - | expression tag |
| Ser -114 | - | expression tag |
| Gly -113 | - | expression tag |
| Thr -112 | - | expression tag |
| Thr -16 | - | linker |
| Gly -15 | - | linker |
| Gly -14 | - | linker |
| Ser -13 | - | linker |
| Thr -12 | - | linker |
| Gly -11 | - | linker |
| Ser -10 | - | linker |
| Gly -9 | - | linker |
| Leu -8 | - | linker |
| Glu -7 | - | linker |
| Val -6 | - | linker |
| Leu -5 | - | linker |
| Phe -4 | - | linker |
| Gln -3 | - | linker |
| Gly -2 | - | linker |
| Pro -1 | - | linker |
| His 0 | - | linker |
A: 1 - 125 (UniProt: A0AAN5PHN6)
| PDB | External Database | Details |
|---|---|---|
| Met -24 | - | expression tag |
| Gly -23 | - | expression tag |
| Ser -22 | - | expression tag |
| Ser -21 | - | expression tag |
| His -20 | - | expression tag |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| Ser -14 | - | expression tag |
| Ser -13 | - | expression tag |
| Gly -12 | - | expression tag |
| Thr -11 | - | expression tag |
| Gly -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Gly -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Asn -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Tyr -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Gly -1 | - | expression tag |
| His 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 1064 | - | expression tag |
| Gly 1065 | - | expression tag |
| Ser 1066 | - | expression tag |
| Ser 1067 | - | expression tag |
| His 1068 | - | expression tag |
| His 1069 | - | expression tag |
| His 1070 | - | expression tag |
| His 1071 | - | expression tag |
| His 1072 | - | expression tag |
| His 1073 | - | expression tag |
| Ser 1074 | - | expression tag |
| Ser 1075 | - | expression tag |
| Gly 1076 | - | expression tag |
| Thr 1077 | - | expression tag |
| Gly 1078 | - | expression tag |
| Ser 1079 | - | expression tag |
| Gly 1080 | - | expression tag |
| Leu 1081 | - | expression tag |
| Glu 1082 | - | expression tag |
| Val 1083 | - | expression tag |
| Leu 1084 | - | expression tag |
| Phe 1085 | - | expression tag |
| Gln 1086 | - | expression tag |
| Gly 1087 | - | expression tag |
| Pro 1088 | - | expression tag |
| His 1089 | - | expression tag |
| Met 1090 | - | expression tag |
| Leu 1091 | - | expression tag |
| Glu 1092 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 93561.1 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 24.3 | |
| All* | Total formula weight | 93585.4 |






