9DS2
Crystal structure of 346-54 Fab in complex with H1 HA from A/California/04/2009(H1N1)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (C, A, E) | Hemagglutinin HA1 chai | polymer | 328 | 36384.0 | 3 | UniProt (A0A5B9ZSV0) Pfam (PF00509) UniProt (by SIFTS) (C3W5S1) | Influenza A virus | |
| 2 | B, D, F (D, B, F) | Hemagglutinin HA2 chain | polymer | 175 | 19992.1 | 3 | UniProt (A0A6J3XB93) Pfam (PF00509) UniProt (by SIFTS) (E0UV84) | Influenza A virus | |
| 3 | G, I, K (G, H, K) | 346-54, Heavy chain | polymer | 229 | 24284.3 | 3 | Homo sapiens | ||
| 4 | H, J, L (I, J, L) | 346-54, Light chain | polymer | 215 | 23482.1 | 3 | Homo sapiens | ||
| 5 | M (M) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 6 | N (N) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 7 | O, P, Q, R, S... (C, D, A, B, E...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) |
Sequence modifications
C, A, E: 11 - 327 (UniProt: A0A5B9ZSV0)
D, B, F: 1 - 174 (UniProt: A0A6J3XB93)
| PDB | External Database | Details |
|---|---|---|
| Asp 8 | - | expression tag |
| Pro 9 | - | expression tag |
| Gly 10 | - | expression tag |
| Ser 186 | Unk 200 | conflict |
| Gly 206 | Ser 220 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ser 175 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 312427.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1010.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1548.5 | |
| All* | Total formula weight | 314986.9 |
