9DQV
Structure of western equine encephalitis virus CBA87 VLP in complex with human PCDH10 EC1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G, M (D, G, J, A) | Structural polyprotein | polymer | 434 | 46703.0 | 4 | UniProt (C7EPF2) Pfam (PF01589) UniProt (by SIFTS) (P13897) | Western equine encephalitis virus | p130 |
| 2 | B, E, H, N (E, H, K, B) | Structural polyprotein | polymer | 403 | 45007.2 | 4 | UniProt (Q1W679) Pfam (PF00943) UniProt (by SIFTS) (P13897) | Western equine encephalitis virus | p130 |
| 3 | C, F, I, O (F, I, L, C) | Capsid protein | polymer | 163 | 17949.4 | 4 | UniProt (P13897) Pfam (PF00944) | Western equine encephalitis virus | Coat protein,C |
| 4 | J, K, L, P (M, N, O, P) | Protocadherin-10 | polymer | 103 | 11719.0 | 4 | UniProt (Q9P2E7) Pfam (PF08266) | Homo sapiens (human) | |
| 5 | AA, BA, CA, DA, EA... (K, A, B, D, E...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 16 | Chemie (NAG) |
Sequence modifications
D, G, J, A: 1 - 434 (UniProt: C7EPF2)
| PDB | External Database | Details |
|---|---|---|
| Val 55 | Ile 852 | conflict |
| Arg 143 | His 940 | conflict |
| Asn 196 | Lys 993 | conflict |
| Thr 269 | Ser 1066 | conflict |
| Asn 323 | Asp 1120 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 485514.8 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 3539.3 | |
| All* | Total formula weight | 489054.1 |
