9DBT
Crystal structure of human astrovirus 1 capsid spike bound to human neonatal Fc receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, J (A, F, I, C) | IgG receptor FcRn large subunit p51 | polymer | 278 | 30874.7 | 4 | UniProt (P55899) Pfam (PF00129) Pfam (PF07654) | Homo sapiens (human) | FcRn,IgG Fc fragment receptor transporter alpha chain,Neonatal Fc receptor |
| 2 | B, D, F, K (B, G, J, D) | Beta-2-microglobulin | polymer | 99 | 11748.2 | 4 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (human) | |
| 3 | G, H, I, L (H, K, L, E) | Structural protein | polymer | 228 | 25231.7 | 4 | UniProt (Q82452) Pfam (PF12226) UniProt (by SIFTS) (O12792) | Human astrovirus 1 | spike |
Sequence modifications
A, F, I, C: 24 - 297 (UniProt: P55899)
H, K, L, E: 429 - 645 (UniProt: Q82452)
| PDB | External Database | Details |
|---|---|---|
| Leu 298 | - | expression tag |
| Val 299 | - | expression tag |
| Pro 300 | - | expression tag |
| Arg 301 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 428 | - | initiating methionine |
| Ala 646 | - | expression tag |
| Ala 647 | - | expression tag |
| Ala 648 | - | expression tag |
| Glu 649 | - | expression tag |
| Leu 650 | - | expression tag |
| Ala 651 | - | expression tag |
| Leu 652 | - | expression tag |
| Val 653 | - | expression tag |
| Pro 654 | - | expression tag |
| Arg 655 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 271418.1 | |
| All* | Total formula weight | 271418.1 |






