Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9D3O

167-bp 5S rDNA nucleosome - closed

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, E)
Histone H3.2polymer9911617.62UniProt (Q71DI3)
Pfam (PF00125)
Homo sapiens (human)H3-clustered histone 13,H3-clustered histone 14,H3-clustered histone 15,Histone H3/m,Histone H3/o
2B, E
(B, F)
Histone H4polymer829279.92UniProt (P62805)
Pfam (PF15511)
Homo sapiens (human)
3C, F
(D, H)
Histone H2B type 1-Mpolymer9510693.32UniProt (Q99879)
Pfam (PF00125)
Homo sapiens (human)Histone H2B.e,H2B/e
4G
(I)
DNA (noncoding strand)polymer14544822.51GenBank (64471)Xenopus borealis (Kenyan clawed frog)
5H
(J)
DNA (coding strand)polymer14544697.41GenBank (64471)Xenopus borealis (Kenyan clawed frog)
6I, J
(C, G)
Histone H2A type 2-Apolymer10911955.02UniProt (Q6FI13)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (human)H2A-clustered histone 18,H2A-clustered histone 19,Histone H2A.2,Histone H2A/o
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight176611.5
All*Total formula weight176611.5
*Water molecules are not included.

240971

PDB entries from 2025-08-27

PDB statisticsPDBj update infoContact PDBjnumon